RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 NANPQ8TBE9 248 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 ARNTL2Q8WYA1 636 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 COPS5Q92905 334 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 SLC38A4Q969I6 547 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 CELF6Q96J87 481 aaKnown RBP11.6□□□□□ -0.55
SHMT2-201ENST00000328923 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-201ENST00000328923 SLC19A3Q9BZV2 496 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 C11orf54Q9H0W9 315 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-201ENST00000328923 XYLT2Q9H1B5 865 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 PORCNQ9H237 461 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 NMRAL1Q9HBL8 299 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 CYP4F12Q9HCS2 524 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 GSN-AS1Q9NRJ2 163 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 CATSPERZQ9NTU4 200 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 MCUBQ9NWR8 336 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 MAP10Q9P2G4 905 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 BAIAP2Q9UQB8 552 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
SHMT2-201ENST00000328923 LOC100130705A0A1B0GUX0 176 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 SLC22A23A1A5C7 686 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 OR2A25A4D2G3 310 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 C9JVG2 144 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 GATCO43716 136 aaKnown RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 PAPSS2O95340 614 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ACSM4P0C7M7 580 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 RNF224P0DH78 156 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 BMP8BP34820 402 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 AIF1P55008 147 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 SLC35A2P78381 396 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 RBP5P82980 135 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 EXOSC2Q13868 293 aaKnown RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 DSG2Q14126 1118 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ETFDHQ16134 617 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ZC3H12BQ5HYM0 836 aaKnown RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 TOR1AIP1Q5JTV8 583 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ZNF691Q5VV52 312 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 FAM180BQ6P0A1 224 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 BMP8AQ7Z5Y6 402 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 KRT77Q7Z794 578 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 GLCCI1Q86VQ1 547 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ZDHHC13Q8IUH4 622 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 CLHC1Q8NHS4 586 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 SPPL2BQ8TCT7 592 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 CERS2Q96G23 380 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 APOL5Q9BWW9 433 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 SETD4Q9NVD3 440 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 PIH1D1Q9NWS0 290 aaKnown RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 PMS2P1A4D2B8 440 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ASB14A6NK59 587 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 WASHC1A8K0Z3 465 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 E9PAM4 449 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 SLC30A4O14863 429 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 MT-CO1P00395 513 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 RAF1P04049 648 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 POLBP06746 335 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 PDGFRAP16234 1089 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 TNFSF8P32971 234 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 NUBP1P53384 320 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 CREMQ03060 361 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 XKR3Q5GH77 459 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 ABI3BPQ7Z7G0 1075 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 C3orf58Q8NDZ4 430 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 BPIFB1Q8TDL5 484 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 RXFP2Q8WXD0 754 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 C19orf60Q96EN9 201 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 DPCDQ9BVM2 203 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 BCO2Q9BYV7 579 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 TRIM45Q9H8W5 580 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-201ENST00000328923 TRPM5Q9NZQ8 1165 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 STAP1Q9ULZ2 295 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 RNF6Q9Y252 685 aa11.59□□□□□ -0.55
SHMT2-201ENST00000328923 A0A0A0MRY4 1105 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 CABYRO75952 493 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 RECQL5O94762 991 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 RPS17P08708 135 aaKnown RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SLC2A4P14672 509 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 PIK3CBP42338 1070 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 KIR2DL3P43628 341 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 NRIP1P48552 1158 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 GPR19Q15760 415 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 GPR158Q5T848 1215 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ANKRD54Q6NXT1 300 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 DLK2Q6UY11 383 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 RANBP10Q6VN20 620 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SCARA5Q6ZMJ2 495 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 VSIG10LQ86VR7 867 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 FUNDC1Q8IVP5 155 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 GDPD1Q8N9F7 314 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF566Q969W8 418 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ROPN1LQ96C74 230 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 WBP1Q96G27 269 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 SPATA13Q96N96 652 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ACE2Q9BYF1 805 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 DUSP21Q9H596 190 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ARNT2Q9HBZ2 717 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 ZDHHC4Q9NPG8 344 aa11.58□□□□□ -0.56
SHMT2-201ENST00000328923 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.58□□□□□ -0.56
SHMT2-201ENST00000328923 EVLQ9UI08 416 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms