RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 LOC100506127A0A0U1RQW1 187 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 SCELO95171 688 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 C7P10643 843 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 WEE1P30291 646 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 DGKEP52429 567 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 ILF2Q12905 390 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 PDE12Q6L8Q7 609 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 RFLNAQ6ZTI6 216 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 OR8J3Q8NGG0 315 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 PSMA8Q8TAA3 256 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 WFDC5Q8TCV5 224 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 UTP15Q8TED0 518 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 SLC22A12Q96S37 553 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 RHNO1Q9BSD3 238 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 C2orf49Q9BVC5 232 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 C6orf62Q9GZU0 229 aaPredicted RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 EPS8L2Q9H6S3 715 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 HMG20AQ9NP66 347 aa12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 RBMX2Q9Y388 322 aaKnown RBP12.59□□□□□ -0.39
HMGCS1-201ENST00000325110 LAMA3Q16787 3333 aa12.58□□□□□ -0.39
HMGCS1-201ENST00000325110 GNG14A0A1W2PPG7 69 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 TAPBPO15533 448 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 HTR1BP28222 390 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 HNF1BP35680 557 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 HMGCLP35914 325 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 KIR3DL1P43629 444 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 PPP3CCP48454 512 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 STK19P49842 368 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 EPS8Q12929 822 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 NPTX1Q15818 432 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 RBM48Q5RL73 367 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 GPR153Q6NV75 609 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 DCDC5Q6ZRR9 648 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 BTLAQ7Z6A9 289 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 AADATQ8N5Z0 425 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 DPP10Q8N608 796 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 OR5K1Q8NHB7 308 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 TAMM41Q96BW9 452 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 EID2BQ96D98 161 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CDK5RAP1Q96SZ6 601 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 KLHL25Q9H0H3 589 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 ABCB10Q9NRK6 738 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 KRT84Q9NSB2 600 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CPQQ9Y646 472 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 OR2AG2A6NM03 316 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CLDN25C9JDP6 229 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 OPN1SWP03999 348 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 UGT2B4P06133 528 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CR2P20023 1033 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CDKN2CP42773 168 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 CLCN4P51793 760 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 ELAVL2Q12926 359 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 ABRQ12979 859 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 PTCHD3Q3KNS1 767 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 NCEH1Q6PIU2 408 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 PAGE2Q7Z2X7 111 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 SNX20Q7Z614 316 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 IGFN1Q86VF2 1251 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 RAET1EQ8TD07 263 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 TADA1Q96BN2 335 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 BARD1Q99728 777 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 SH3BP1Q9Y3L3 701 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 ZNF99A8MXY4 864 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 EPN2O95208 641 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 GALTP07902 379 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 SEPHS1P49903 392 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 TMBIM6P55061 237 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 PCBP2Q15366 365 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■■ 36.2
HMGCS1-201ENST00000325110 Q6ZNX1 250 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 SLC44A2Q8IWA5 706 aaPredicted RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 C10orf111Q8N326 155 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 HDAC2Q92769 488 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 OSBPL10Q9BXB5 764 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 YTHDF1Q9BYJ9 559 aaKnown RBP12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 REEP1Q9H902 201 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 MTRRQ9UBK8 725 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 TPRKBQ9Y3C4 175 aa12.58□□□□□ -0.4
HMGCS1-201ENST00000325110 FUOMA2VDF0 154 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 FPGTO14772 594 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 IGLV3-27P01718 113 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 FUCA1P04066 466 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 DBTP11182 482 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 BPIP17213 487 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ST13P50502 369 aaKnown RBP12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 NCS1P62166 190 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 CHIT1Q13231 466 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 INAQ16352 499 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 RIMKLAQ8IXN7 391 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 ALDH16A1Q8IZ83 802 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 UBE2FQ969M7 185 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 RHBDF1Q96CC6 855 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 AASDHPPTQ9NRN7 309 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 MARCH5Q9NX47 278 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 TMEM9Q9P0T7 183 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 SNX6Q9UNH7 406 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 UPK1AO00322 258 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 NPPAP01160 153 aa12.57□□□□□ -0.4
HMGCS1-201ENST00000325110 XPAP23025 273 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms