RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 OLIG2Q13516 323 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ITGA9Q13797 1035 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 OASLQ15646 514 aaKnown RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 KCTD11Q693B1 232 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 FAM151BQ6UXP7 276 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 C11orf96Q7Z7L8 435 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ACBD4Q8NC06 268 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 CHDHQ8NE62 594 aaPredicted RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ATG4AQ8WYN0 398 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 PTERQ96BW5 349 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 C19orf43Q9BQ61 176 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 TBL1YQ9BQ87 522 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 APOL2Q9BQE5 337 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ENKD1Q9H0I2 346 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 CXXC4Q9H2H0 198 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 DLL4Q9NR61 685 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 SMOXQ9NWM0 555 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 SEC14L3Q9UDX4 400 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 PPP2R2CQ9Y2T4 447 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 ARL5AQ9Y689 179 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 CFAP20Q9Y6A4 193 aaKnown RBP12.72□□□□□ -0.37
SYCN-201ENST00000318438 CACNA1CQ13936 2221 aa12.72□□□□□ -0.37
SYCN-201ENST00000318438 KIAA1324LA8MWY0 1029 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 GAPDHSO14556 408 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 BUD23O43709 281 aaKnown RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 KCNJ13O60928 360 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 METTL18O95568 372 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 CRTAMO95727 393 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 ESRRAP11474 423 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 VCLP18206 1134 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 POLR2CP19387 275 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 CDH3P22223 829 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 STIP1P31948 543 aaKnown RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 TMEM115Q12893 351 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 MSLNQ13421 630 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 C3AR1Q16581 482 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 IRAK1BP1Q5VVH5 260 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 NCCRP1Q6ZVX7 275 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 TRAPPC5Q8IUR0 188 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 DDHD1Q8NEL9 900 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 GDAP1Q8TB36 358 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 ADAMTS18Q8TE60 1221 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 C17orf62Q9BQA9 187 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 ZCCHC2Q9C0B9 1178 aaKnown RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 LRRC40Q9H9A6 602 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 IMP3Q9NV31 184 aaKnown RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 NDOR1Q9UHB4 597 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 SERTAD3Q9UJW9 196 aa12.71□□□□□ -0.37
SYCN-201ENST00000318438 RPH3AQ9Y2J0 694 aaPredicted RBP12.71□□□□□ -0.37
SYCN-201ENST00000318438 COL6A5A8TX70 2615 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
SYCN-201ENST00000318438 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
SYCN-201ENST00000318438 CSPG4Q6UVK1 2322 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 GPR39O43194 453 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 SLC19A2O60779 497 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 WISP2O76076 250 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 KLHL18O94889 574 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 PRAMEF1O95521 474 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 AP2A1O95782 977 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 HBQ1P09105 142 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 GTF2H3Q13889 308 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.7□□□□□ -0.38
SYCN-201ENST00000318438 LDLRAP1Q5SW96 308 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 PRIMA1Q86XR5 153 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 CARFQ8N187 725 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 OR4K2Q8NGD2 314 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 LHPPQ9H008 270 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 KLHL25Q9H0H3 589 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 ZKSCAN5Q9Y2L8 839 aa12.7□□□□□ -0.38
SYCN-201ENST00000318438 ABCA4P78363 2273 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 PCM1Q15154 2024 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 ERI2A8K979 691 aaKnown RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 PSMD3O43242 534 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 POP7O75817 140 aaKnown RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 MTHFD1P11586 935 aaKnown RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 ST6GAL1P15907 406 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 ZNF140P52738 457 aaPredicted RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 CASP6P55212 293 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 DCDP81605 110 aaKnown RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 DMPKQ09013 629 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 MFAP5Q13361 173 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 PTPRCAPQ14761 206 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 SIX1Q15475 284 aaPredicted RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 GPRC6AQ5T6X5 926 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 ISLR2Q6UXK2 745 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 AMZ2Q86W34 360 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 ZNF398Q8TD17 642 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 C1orf54Q8WWF1 131 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 SMR3AQ99954 134 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms