RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 CDK15Q96Q40 435 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 PRRX2Q99811 253 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 GATA5Q9BWX5 397 aaPredicted RBP14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 C20orf27Q9GZN8 174 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SLCO1B3Q9NPD5 702 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 WASH6PQ9NQA3 447 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 SEMA4GQ9NTN9 838 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 ICKQ9UPZ9 632 aa14.94□□□□□ -0.02
PDLIM5-202ENST00000318007 AGRPO00253 132 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SIGLEC6O43699 453 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ITM2AO43736 263 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 GDF9O60383 454 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 TRIM13O60858 407 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 CHRNGP07510 517 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ARRB2P32121 409 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MDH1P40925 334 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC18A1P54219 525 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 PNLIPRP1P54315 467 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SETDB1Q15047 1291 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ZNF678Q5SXM1 525 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 RAB44Q7Z6P3 723 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC9B2Q86UD5 537 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MYLK4Q86YV6 388 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 TEX9Q8N6V9 391 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 Q8N9G6 341 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 RDH11Q8TC12 318 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 TRPC4APQ8TEL6 797 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SH3KBP1Q96B97 665 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 THOC1Q96FV9 657 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 EDEM2Q9BV94 578 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ZMYND15Q9H091 742 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 KIR3DX1Q9H7L2 352 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MANSC1Q9H8J5 431 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 RDH14Q9HBH5 336 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 PARD6AQ9NPB6 346 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 INTS7Q9NVH2 962 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MID2Q9UJV3 735 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 KIR2DS5A0A0G2JLQ3 304 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 A0A0G2JNG1 304 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 A0A1B0GTL3 188 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 KIR2DS3K7RE56 304 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MYO1CO00159 1063 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 PRKAA2P54646 552 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 AP1S2P56377 157 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 HERVK_113P63132 956 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 UBE2IP63279 158 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 BST1Q10588 318 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 KIR2DS5Q14953 304 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 NKAIN2Q5VXU1 208 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SULT1C3Q6IMI6 304 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ZNF438Q7Z4V0 828 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SNX31Q8N9S9 440 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 LRRC8CQ8TDW0 803 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SETD7Q8WTS6 366 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MENTQ9BUN1 341 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ERVK-6Q9BXR3 956 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 PITPNM3Q9BZ71 974 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 FAM107BQ9H098 131 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 SRMSQ9H3Y6 488 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MVB12BQ9H7P6 319 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 POT1Q9NUX5 634 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 OGFRQ9NZT2 677 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 MARCOQ9UEW3 520 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 LNPEPQ9UIQ6 1025 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 PTBP2Q9UKA9 531 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 ANGPTL3Q9Y5C1 460 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 HEBP2Q9Y5Z4 205 aa14.93□□□□□ -0.02
PDLIM5-202ENST00000318007 CPED1A4D0V7 1026 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 GSAPA4D1B5 854 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 TCP11X1B4DZS4 312 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 E7ENX8 843 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 KATNA1O75449 491 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 KITP10721 976 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 XRCC1P18887 633 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 PPP1CAP62136 330 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 TAP2Q03519 686 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 RBBP7Q16576 425 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 C14orf28Q4W4Y0 310 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 AMIGO1Q86WK6 493 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 RASGRP3Q8IV61 690 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC22A9Q8IVM8 553 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 OR52B6Q8NGF0 335 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 ZNF75CPQ92670 426 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 APOLD1Q96LR9 279 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 SLC38A3Q99624 504 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 CD244Q9BZW8 370 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 KLHL25Q9H0H3 589 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 SPHK1Q9NYA1 384 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 LRIT1Q9P2V4 623 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 OPTCQ9UBM4 332 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 TAC3Q9UHF0 121 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 SH2B3Q9UQQ2 575 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 RNF215Q9Y6U7 377 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 OTOGLQ3ZCN5 2332 aa14.92□□□□□ -0.02
PDLIM5-202ENST00000318007 OR6C74A6NCV1 312 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 RHPN2P1A8MT19 583 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 E2F3O00716 465 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 STK16O75716 305 aa14.91□□□□□ -0.02
PDLIM5-202ENST00000318007 ZNF806P0C7X5 589 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms