RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 INPP5KQ9BT40 448 aa20.08■□□□□ 0.81
TTC39C-202ENST00000317571 THUMPD3Q9BV44 507 aaKnown RBP20.08■□□□□ 0.81
TTC39C-202ENST00000317571 ATG10Q9H0Y0 220 aa20.08■□□□□ 0.81
TTC39C-202ENST00000317571 PCDHB14Q9Y5E9 798 aa20.08■□□□□ 0.81
TTC39C-202ENST00000317571 WASH3PC4AMC7 463 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 EIF3FO00303 357 aaPredicted RBP20.08■□□□□ 0.8
TTC39C-202ENST00000317571 LEFTY1O75610 366 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 KRT6AP02538 564 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 KRT6BP04259 564 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 C7P10643 843 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 KRT6CP48668 564 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 IST1P53990 364 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 RPS14P62263 151 aaKnown RBP20.08■□□□□ 0.8
TTC39C-202ENST00000317571 NTHL1P78549 312 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 ADARB1P78563 741 aaKnown RBP20.08■□□□□ 0.8
TTC39C-202ENST00000317571 KCTD21Q4G0X4 260 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 TMEM259Q4ZIN3 620 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 USP51Q70EK9 711 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 B4GALNT2Q8NHY0 566 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 FBXO30Q8TB52 745 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 TMBIM1Q969X1 311 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 TSSK3Q96PN8 268 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 SPHK2Q9NRA0 654 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 FAM8A1Q9UBU6 413 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 PCDHGA11Q9Y5H2 935 aa20.08■□□□□ 0.8
TTC39C-202ENST00000317571 C8GP07360 202 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 CAPGP40121 348 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 CDKN2CP42773 168 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 GGTA1PQ4G0N0 100 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 OTUD3Q5T2D3 398 aaPredicted RBP20.07■□□□□ 0.8
TTC39C-202ENST00000317571 TTC33Q6PID6 262 aaPredicted RBP20.07■□□□□ 0.8
TTC39C-202ENST00000317571 ANKRD46Q86W74 232 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 GALNT13Q8IUC8 556 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 RASGRP3Q8IV61 690 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 ZSWIM3Q96MP5 696 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 GORASP2Q9H8Y8 452 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 GSNP06396 782 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 RAP2AP10114 183 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 SDC1P18827 310 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 CD22P20273 847 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 GZMMP51124 257 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 EPHA5P54756 1037 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 TUBA4AP68366 448 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 POM121L1PQ3SYA9 428 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 PLPP4Q5VZY2 271 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 ZNF551Q7Z340 670 aaPredicted RBP20.07■□□□□ 0.8
TTC39C-202ENST00000317571 LILRA3Q8N6C8 439 aaPredicted RBP20.07■□□□□ 0.8
TTC39C-202ENST00000317571 L3MBTL4Q8NA19 623 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 TDP1Q9NUW8 608 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 ERVW-1Q9UQF0 538 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 WNT6Q9Y6F9 365 aa20.07■□□□□ 0.8
TTC39C-202ENST00000317571 OR2AG2A6NM03 316 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 TULP3O75386 442 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 MPC1LP0DKB6 136 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 PFN3P60673 137 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 CTBSQ01459 385 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ANKRD34AQ69YU3 496 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 DHRSXQ8N5I4 330 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 PAWRQ96IZ0 340 aaKnown RBP20.06■□□□□ 0.8
TTC39C-202ENST00000317571 CPPED1Q9BRF8 314 aaPredicted RBP20.06■□□□□ 0.8
TTC39C-202ENST00000317571 KAT8Q9H7Z6 458 aaKnown RBP20.06■□□□□ 0.8
TTC39C-202ENST00000317571 PCDH12Q9NPG4 1184 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 PKD2L2Q9NZM6 624 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 BMP10O95393 424 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 CLDN8P56748 225 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 SLC14A1Q13336 389 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 LAPTM5Q13571 262 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ZNF77Q15935 545 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ARSIQ5FYB1 569 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ZNF366Q8N895 744 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 BDH2Q9BUT1 245 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 FAM83DQ9H4H8 585 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ELOVL6Q9H5J4 265 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 GPRC5BQ9NZH0 403 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 CIDEBQ9UHD4 219 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 ADGRE2Q9UHX3 823 aa20.06■□□□□ 0.8
TTC39C-202ENST00000317571 LRATO95237 230 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 RHOP08100 348 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 TIMP2P16035 220 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 PFKLP17858 780 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 VIPR1P32241 457 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 HTRA4P83105 476 aaPredicted RBP20.05■□□□□ 0.8
TTC39C-202ENST00000317571 PLCL1Q15111 1095 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 ZIK1Q3SY52 487 aaPredicted RBP20.05■□□□□ 0.8
TTC39C-202ENST00000317571 PLEKHS1Q5SXH7 462 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 LRIF1Q5T3J3 769 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 GCNT7Q6ZNI0 430 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 SPRED2Q7Z698 418 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 CALHM3Q86XJ0 350 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 HS3ST5Q8IZT8 346 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 ELMO1Q92556 727 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 CLP1Q92989 425 aaKnown RBP20.05■□□□□ 0.8
TTC39C-202ENST00000317571 HHIPQ96QV1 700 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 RIOK2Q9BVS4 552 aaKnown RBP20.05■□□□□ 0.8
TTC39C-202ENST00000317571 LIN28AQ9H9Z2 209 aaKnown RBP20.05■□□□□ 0.8
TTC39C-202ENST00000317571 C8orf4Q9NR00 106 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 UPK3BL1B0FP48 263 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 UPK3BL2E5RIL1 263 aa20.05■□□□□ 0.8
TTC39C-202ENST00000317571 CTSCP53634 463 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms