RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TBC1D3BA6NDS4 549 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 SLC9A3R1O14745 358 aaPredicted RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 ARPC2O15144 300 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 CLDN9O95484 217 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ADH1CP00326 375 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 MMP12P39900 470 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 CDH15P55291 814 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 EMX2Q04743 252 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 SYTL3Q4VX76 610 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 SPANXN4Q5MJ08 99 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 HMBOX1Q6NT76 420 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 TMEM220Q6QAJ8 160 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 HACD2Q6Y1H2 254 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ANKRD46Q86W74 232 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ZFAND4Q86XD8 727 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 SLC12A9Q9BXP2 914 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 PFDN4Q9NQP4 134 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 DEC1Q9P2X7 70 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 DLGAP4Q9Y2H0 992 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 C2orf16Q68DN1 1984 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 FAM234BA2RU67 622 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 SAC3D1A6NKF1 404 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 CFAP99D6REC4 459 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ZNF30P17039 623 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 TACR1P25103 407 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 HSPA13P48723 471 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 UBE3AQ05086 875 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 TMEM115Q12893 351 aaPredicted RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 PDCD4Q53EL6 469 aaKnown RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 CDC26Q8NHZ8 85 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 BTN2A2Q8WVV5 523 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 EGLN2Q96KS0 407 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 TSSK3Q96PN8 268 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 SEPHS2Q99611 448 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 SLC29A1Q99808 456 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 KCTD14Q9BQ13 255 aaPredicted RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 TRIM54Q9BYV2 358 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 LRTM1Q9HBL6 345 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 ABCD2Q9UBJ2 740 aa12.1□□□□□ -0.47
RNF4-201ENST00000314289 LEF1Q9UJU2 399 aaPredicted RBP12.1□□□□□ -0.47
RNF4-201ENST00000314289 ARHGEF33A8MVX0 844 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 C5orf67F2Z3F1 127 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ANKRD28O15084 1053 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 SPINT1O43278 529 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 RGS14O43566 566 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 EEDO75530 441 aaKnown RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 STAMBPO95630 424 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 PTPN5P54829 565 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 OR4D2P58180 307 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 SHHQ15465 462 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 OR2T34Q8NGX1 318 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 OR2T3Q8NH03 318 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 GLYATL1Q969I3 302 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 OTUB2Q96DC9 234 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ASB16Q96NS5 453 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 NRTNQ99748 197 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 HAUS8Q9BT25 410 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 DCUN1D5Q9BTE7 237 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 EBPLQ9BY08 206 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 OR2AG1Q9H205 316 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ELOVL6Q9H5J4 265 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 FBXO10Q9UK96 956 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 KNL1Q8NG31 2342 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 VCANP13611 3396 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 NUAK1O60285 661 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 DFNA5O60443 496 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 GSNP06396 782 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 C8BP07358 591 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 EBLN1P0CF75 366 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 GNPDA1P46926 289 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ZNF234Q14588 700 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 CYP51A1Q16850 503 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TBCELQ5QJ74 424 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ERAP2Q6P179 960 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 CRTC3Q6UUV7 619 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 TECPR1Q7Z6L1 1165 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ASZ1Q8WWH4 475 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 HEBP1Q9NRV9 189 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 ZIM2Q9NZV7 527 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 WNT9AO14904 365 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 FOXD2O60548 495 aaPredicted RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 RECQL5O94762 991 aaPredicted RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 CBSLP0DN79 551 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 EFNA1P20827 205 aaPredicted RBP12.09□□□□□ -0.47
RNF4-201ENST00000314289 CBSP35520 551 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 CHIT1Q13231 466 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 GAB4Q2WGN9 574 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 C9orf64Q5T6V5 341 aa12.09□□□□□ -0.47
RNF4-201ENST00000314289 RAET1GQ6H3X3 334 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms