RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ABCG1P45844 678 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 NRIP1P48552 1158 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 FMO1Q01740 532 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SIM2Q14190 667 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 HAGHLQ6PII5 290 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 FTMTQ8N4E7 242 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 UBE2Q2LH0YL09 131 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 DPEP1P16444 411 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SELENOVP59797 346 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 ABRAXAS2Q15018 415 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SCIMPQ6UWF3 145 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PFDN5Q99471 154 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 MAGEH1Q9H213 219 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 IFNA1P01562 189 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SOX10P56693 466 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 FOXM1Q08050 763 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 ATAT1Q5SQI0 421 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 C3P1Q6ZMU1 363 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 TMCO2Q7Z6W1 182 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CCSER2Q9H7U1 834 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 PNPOQ9NVS9 261 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 POLR3BQ9NW08 1133 aaPredicted RBP15.19■□□□□ 0.02
HCFC1-201ENST00000310441 CDC14AQ9UNH5 594 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
HCFC1-201ENST00000310441 ASTN1O14525 1302 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 CYP3A5P20815 502 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 HERVK_113P63132 956 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SLC30A2Q9BRI3 323 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ERVK-6Q9BXR3 956 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 B4GALT4O60513 344 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 C2P06681 752 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SCNN1GP51170 649 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SEC23BQ15437 767 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 CRB2Q5IJ48 1285 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 RGMAQ96B86 450 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 GIMAP5Q96F15 307 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 TM9SF3Q9HD45 589 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 E9PAM4 449 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 HRGP04196 525 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ZMIZ2Q8NF64 920 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SLC13A3Q8WWT9 602 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 OR10A4Q9H209 315 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SNTG1Q9NSN8 517 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 C9J4A7 227 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 RASGRP1O95267 797 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 MPSTP25325 297 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SSTP61278 116 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 NAE1Q13564 534 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SHQ1Q6PI26 577 aaKnown RBP15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ARSKQ6UWY0 536 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ISLR2Q6UXK2 745 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ACTR6Q9GZN1 396 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 TP73O15350 636 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 PRPS1L1P21108 318 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 DNAJB1P25685 340 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 S100A10P60903 97 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 IFNL1Q8IU54 200 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 SLC22A15Q8IZD6 547 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 POC1BQ8TC44 478 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ASB9Q96DX5 294 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 PIWIL1Q96J94 861 aaKnown RBP15.18■□□□□ 0.02
HCFC1-201ENST00000310441 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 FSCN2O14926 492 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 HOXB9P17482 250 aaPredicted RBP15.18■□□□□ 0.02
HCFC1-201ENST00000310441 CD72P21854 359 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 LHCGRP22888 699 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 GLP1RP43220 463 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
HCFC1-201ENST00000310441 POMZP3Q6PJE2 187 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ARHGAP12Q8IWW6 846 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 GPC2Q8N158 579 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ATP6V1C2Q8NEY4 427 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 S100PBPQ96BU1 408 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 FEM1CQ96JP0 617 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 MKS1Q9NXB0 559 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM9Q9P0T7 183 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF878C9JN71 531 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 MXD1Q05195 221 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 MERTKQ12866 999 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 OR10A6Q8NH74 314 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 GPR151Q8TDV0 419 aa15.18■□□□□ 0.02
HCFC1-201ENST00000310441 JSRP1Q96MG2 331 aaPredicted RBP15.18■□□□□ 0.02
HCFC1-201ENST00000310441 HYKKA2RU49 373 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 HK1P19367 917 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ERVK-8P63133 956 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZACNQ401N2 412 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 KCNK18Q7Z418 384 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 AURKBQ96GD4 344 aaPredicted RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 PTPRJQ12913 1337 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 IFT172Q9UG01 1749 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SMIM35A0A1B0GVV1 85 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZSCAN5BA6NJL1 495 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 AQP12BA6NM10 295 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SYN3O14994 580 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 TBX1O43435 398 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 NDUFV1P49821 464 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 NOMO3P69849 1222 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 TATDN1Q6P1N9 297 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SLC29A4Q7RTT9 530 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms