RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 PAQR3Q6TCH7 311 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 OR10H4Q8NGA5 316 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 DNASE1L2Q92874 299 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 CACNB4O00305 520 aaPredicted RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 NDUFV1P49821 464 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 POM121L1PQ3SYA9 428 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 ZNF354BQ96LW1 612 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 CORO1BQ9BR76 489 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 BCO2Q9BYV7 579 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 SLC35C2Q9NQQ7 365 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 MARK1Q9P0L2 795 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 IKZF2Q9UKS7 526 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 E7ESA3 106 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 J3QRK9 145 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 PI15O43692 258 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 AHSGP02765 367 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 BRCC3P46736 316 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 EIF5AP63241 154 aaKnown RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 GPR33Q49SQ1 333 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 TXNRD3NBQ6F5E7 133 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 CFAP206Q8IYR0 622 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 FBXL8Q96CD0 374 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 DPEP3Q9H4B8 488 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 RIPK3Q9Y572 518 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 COLEC10Q9Y6Z7 277 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 GSTM3P21266 225 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 KHKP50053 298 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 ARF5P84085 180 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 KLHL36Q8N4N3 616 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 INO80EQ8NBZ0 244 aaPredicted RBP12.9□□□□□ -0.34
SNED1-201ENST00000310397 CCDC107Q8WV48 283 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 FUBP3Q96I24 572 aaKnown RBP eCLIP12.9□□□□□ -0.34
SNED1-201ENST00000310397 FRMD6Q96NE9 622 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 HTATIP2Q9BUP3 242 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 CDADC1Q9BWV3 514 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 FAM83DQ9H4H8 585 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 SLC17A6Q9P2U8 582 aa12.9□□□□□ -0.34
SNED1-201ENST00000310397 OR1D2P34982 312 aa12.9□□□□□ -0.35
SNED1-201ENST00000310397 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.35
SNED1-201ENST00000310397 ABHD18Q0P651 414 aa12.9□□□□□ -0.35
SNED1-201ENST00000310397 IDNKQ5T6J7 187 aa12.9□□□□□ -0.35
SNED1-201ENST00000310397 EXOSC8Q96B26 276 aaKnown RBP12.9□□□□□ -0.35
SNED1-201ENST00000310397 ATG10Q9H0Y0 220 aa12.9□□□□□ -0.35
SNED1-201ENST00000310397 ARL5AQ9Y689 179 aa12.9□□□□□ -0.35
SNED1-201ENST00000310397 PRODHO43272 600 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 ECI2O75521 394 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 POP4O95707 220 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 FAM163BP0C2L3 166 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 ARSFP54793 590 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 UPF1Q92900 1129 aaKnown RBP eCLIP12.89□□□□□ -0.35
SNED1-201ENST00000310397 ENTPD6O75354 484 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 RASAL1O95294 804 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 PRAMEF12O95522 483 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 TM4SF1P30408 202 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 DCDC1P59894 354 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 DSC3Q14574 896 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 ASRGL1Q7L266 308 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CYP2U1Q7Z449 544 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 POLR3BQ9NW08 1133 aaPredicted RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 STOX2Q9P2F5 926 aaPredicted RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 MYBPHLA2RUH7 354 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CREG1O75629 220 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 HMGN1P05114 100 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CD2P06729 351 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 AMD1P17707 334 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 FPR1P21462 350 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 SMSP52788 366 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 SLC24A5Q71RS6 500 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 GPR152Q8TDT2 470 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 PCDHGC4Q9Y5F7 938 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 C4BP0C0L5 1744 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CCL22O00626 93 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 HLA-DQB2P05538 268 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 ZNF423Q2M1K9 1284 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 NCCRP1Q6ZVX7 275 aaPredicted RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CBSLP0DN79 551 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 KELP23276 732 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 LMO2P25791 158 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 CBSP35520 551 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 ENTPD1P49961 510 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 MAZP56270 477 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 CD83Q01151 205 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 SEMA3AQ14563 771 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 LGI4Q8N135 537 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 DDX1Q92499 740 aaKnown RBP12.89□□□□□ -0.35
SNED1-201ENST00000310397 SIGLEC10Q96LC7 697 aa12.89□□□□□ -0.35
SNED1-201ENST00000310397 PRICKLE1Q96MT3 831 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms