RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ECHS1P30084 290 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PBX3P40426 434 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 GNPDA1P46926 289 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 S100A12P80511 92 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 RPA4Q13156 261 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 C4orf46Q504U0 113 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 FAM76BQ5HYJ3 339 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 HECTD2Q5U5R9 776 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PRAMEF17Q5VTA0 474 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SDHAF4Q5VUM1 108 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PYHIN1Q6K0P9 492 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 JAZF1Q86VZ6 243 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ZDHHC21Q8IVQ6 265 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ZNF717Q9BY31 904 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 FXYD6Q9H0Q3 95 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 ZNF639Q9UID6 485 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CDH7Q9ULB5 785 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CPSF4LA6NMK7 179 aaKnown RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 OR10H2O60403 315 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CLPXO76031 633 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CHRNA1P02708 482 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ADH5P11766 374 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 COL6A2P12110 1019 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 FUT4P22083 530 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SLC6A4P31645 630 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SLC15A1P46059 708 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 MAXP61244 160 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 TOMM20Q15388 145 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 LYPLAL1Q5VWZ2 237 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 HAGHLQ6PII5 290 aaPredicted RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 ATCAYQ86WG3 371 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 GPALPP1Q8IXQ4 340 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 RBM12BQ8IXT5 1001 aaKnown RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 ADGRG2Q8IZP9 1017 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 NAT16Q8N8M0 369 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PHC3Q8NDX5 983 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 OR10A6Q8NH74 314 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CLIP3Q96DZ5 547 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 PCDHAC1Q9H158 963 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 CD320Q9NPF0 282 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 TMPRSS4Q9NRS4 437 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 SLC7A8Q9UHI5 535 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 HSPB11Q9Y547 144 aa8.03□□□□□ -1.12
VPS41-202ENST00000310301 KIAA0100Q14667 2235 aaKnown RBP8.03□□□□□ -1.12
VPS41-202ENST00000310301 GTPBP1O00178 669 aaKnown RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 CXCR6O00574 342 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 NPC1O15118 1278 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 PIGRP01833 764 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 CREB1P16220 341 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 CORO1AP31146 461 aaKnown RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 FOXN2P32314 431 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 GDI2P50395 445 aaKnown RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 ALG11Q2TAA5 492 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 IL23RQ5VWK5 629 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 RAP1GAP2Q684P5 730 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 CDCA2Q69YH5 1023 aaPredicted RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 ELMOD2Q8IZ81 293 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 SYNPOQ8N3V7 929 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 ZNF248Q8NDW4 579 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 ZNF548Q8NEK5 533 aaPredicted RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 OR2L3Q8NG85 312 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 OR5K1Q8NHB7 308 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 CRELD1Q96HD1 420 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 CDADC1Q9BWV3 514 aa8.02□□□□□ -1.12
VPS41-202ENST00000310301 GTPBP2Q9BX10 602 aaKnown RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 NUSAP1Q9BXS6 441 aaKnown RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 UBE2ZQ9H832 354 aaPredicted RBP8.02□□□□□ -1.12
VPS41-202ENST00000310301 AURKAO14965 403 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 IRAK2O43187 625 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 NARSO43776 548 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 PPM1BO75688 479 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SYPP08247 313 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 RAP2AP10114 183 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SAGP10523 405 aaPredicted RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 SLC7A1P30825 629 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ACSL1P33121 698 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 MAGEA11P43364 429 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 KIR3DL1P43629 444 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SYT16Q17RD7 645 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 CPT1BQ92523 772 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SHC3Q92529 594 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 KAT2AQ92830 837 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 RFKQ969G6 155 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 APOLD1Q96LR9 279 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 C12orf66Q96MD2 445 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 SEMA3CQ99985 751 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 P2RY13Q9BPV8 354 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 MCMBPQ9BTE3 642 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 AARSD1Q9BTE6 412 aaKnown RBP8.02□□□□□ -1.13
VPS41-202ENST00000310301 GMIPQ9P107 970 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TOGARAM1Q9Y4F4 1720 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 ADAMDEC1O15204 470 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 IFNW1P05000 195 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 TFPTP0C1Z6 253 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 AMD1P17707 334 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 LHCGRP22888 699 aa8.02□□□□□ -1.13
VPS41-202ENST00000310301 STOMP27105 288 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms