RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ANKS6Q68DC2 871 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 IRGCQ6NXR0 463 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 LRIG3Q6UXM1 1119 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 SH2D5Q6ZV89 423 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 B3GNT8Q7Z7M8 397 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 PLXDC1Q8IUK5 500 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 PPFIBP2Q8ND30 876 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 OR2L8Q8NGY9 312 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 ACMSDQ8TDX5 336 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 ZNF480Q8WV37 535 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 ADAMTS14Q8WXS8 1223 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 HIST1H2AHQ96KK5 128 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 CCDC138Q96M89 665 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 TGM7Q96PF1 710 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 HIST1H2AJQ99878 128 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 H2AFJQ9BTM1 129 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 RAB11FIP5Q9BXF6 653 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 TRIM54Q9BYV2 358 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 SPATA7Q9P0W8 599 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 KLHL3Q9UH77 587 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 LNPEPQ9UIQ6 1025 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 OARD1Q9Y530 152 aa12.48□□□□□ -0.41
APTX-201ENST00000309615 COL6A2P12110 1019 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 IMPA1P29218 277 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 PEBP1P30086 187 aaKnown RBP12.47□□□□□ -0.41
APTX-201ENST00000309615 PNLIPRP1P54315 467 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 AP1S2P56377 157 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 PRKAA1Q13131 559 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 ACAP2Q15057 778 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 TGFBIQ15582 683 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 ZXDCQ2QGD7 858 aaPredicted RBP12.47□□□□□ -0.41
APTX-201ENST00000309615 SNAP47Q5SQN1 464 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 ARMC6Q6NXE6 501 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 TMEM71Q6P5X7 295 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 RBM44Q6ZP01 1051 aaKnown RBP12.47□□□□□ -0.41
APTX-201ENST00000309615 FAM92BQ6ZTR7 304 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 FRA10AC1Q70Z53 315 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 RAB42Q8N4Z0 105 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 OR4D9Q8NGE8 314 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 PPM1MQ96MI6 270 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 TWSG1Q9GZX9 223 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 RAB33BQ9H082 229 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 STOX2Q9P2F5 926 aaPredicted RBP12.47□□□□□ -0.41
APTX-201ENST00000309615 EPHA6Q9UF33 1036 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 RNF112Q9ULX5 631 aa12.47□□□□□ -0.41
APTX-201ENST00000309615 MN1Q10571 1320 aaPredicted RBP12.47□□□□□ -0.41
APTX-201ENST00000309615 IGHV5-10-1A0A0J9YXX1 117 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 PIPSLA2A3N6 862 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 PABPN1LA6NDY0 278 aaKnown RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 NCF1BA6NI72 391 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 NCF1CA8MVU1 366 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 E7ENX8 843 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 KERAO60938 352 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 MT-CO3P00414 261 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 C9P02748 559 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 NCF1P14598 390 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 KRT4P19013 534 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 KPNA2P52292 529 aaKnown RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 TAP2Q03519 686 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 ARHGAP19Q14CB8 494 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 CLPPQ16740 277 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 N4BP2L1Q5TBK1 243 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 KLC3Q6P597 504 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 SUSD1Q6UWL2 747 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 TRABD2AQ86V40 505 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 MARCH9Q86YJ5 346 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 GPSM1Q86YR5 675 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 SLITRK4Q8IW52 837 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 SYTL1Q8IYJ3 562 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 CHCHD4Q8N4Q1 142 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 FLVCR1-AS1Q8TAF5 88 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 HMGCLL1Q8TB92 370 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 STAG3L4Q8TBR4 150 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 EXT2Q93063 718 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 ZDHHC12Q96GR4 267 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 ATOH8Q96SQ7 321 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 ATG10Q9H0Y0 220 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 ACTR10Q9NZ32 417 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 CLCA2Q9UQC9 943 aa12.46□□□□□ -0.41
APTX-201ENST00000309615 COL27A1Q8IZC6 1860 aaPredicted RBP12.46□□□□□ -0.41
APTX-201ENST00000309615 A0A1W2PPV9 198 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 FAM149AA5PLN7 773 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 C2orf74A8MZ97 194 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 ISM1B1AKI9 464 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 KIF1CO43896 1103 aaKnown RBP12.46□□□□□ -0.42
APTX-201ENST00000309615 UGT2B7P16662 529 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 PSMB5P28074 263 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 PRDX3P30048 256 aaKnown RBP12.46□□□□□ -0.42
APTX-201ENST00000309615 HSD17B2P37059 387 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 ZFP36L1Q07352 338 aaKnown RBP12.46□□□□□ -0.42
APTX-201ENST00000309615 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.42
APTX-201ENST00000309615 TSNAXIP1Q2TAA8 658 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 TECRLQ5HYJ1 363 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 RAB44Q7Z6P3 723 aaPredicted RBP12.46□□□□□ -0.42
APTX-201ENST00000309615 FAM20CQ8IXL6 584 aa12.46□□□□□ -0.42
APTX-201ENST00000309615 SRRM1Q8IYB3 904 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms