RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 RASGEF1AQ8N9B8 481 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 FBXO30Q8TB52 745 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 FRS2Q8WU20 508 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 CXorf40BQ96DE9 158 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 LMLNQ96KR4 655 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 TTC1Q99614 292 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 CTRCQ99895 268 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 MGME1Q9BQP7 344 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 ACTR8Q9H981 624 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 SLC52A3Q9NQ40 469 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 TAS2R13Q9NYV9 303 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 KLQ9UEF7 1012 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 VPS4AQ9UN37 437 aa4.83□□□□□ -1.64
CAST-201ENST00000309190 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.83□□□□□ -1.64
CAST-201ENST00000309190 MYO7BQ6PIF6 2116 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MYO16Q9Y6X6 1858 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 IGLV3-10A0A075B6K4 115 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 LRRC72A6NJI9 287 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 H7BY64 318 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PPM1DO15297 605 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 NVLO15381 856 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 ITM2AO43736 263 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CCDC22O60826 627 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 USP1O94782 785 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 FUCA1P04066 466 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CHRNB1P11230 501 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 KIR2DL1P43626 348 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 ALDH3B2P48448 385 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ARL4DP49703 201 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ADPRHP54922 357 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MTTPP55157 894 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TAS2R38P59533 333 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 AP1S1P61966 158 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 POU4F1Q01851 419 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PLOD1Q02809 727 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 PCLAFQ15004 111 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CYHR1Q6ZMK1 362 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TMPRSS11BQ86T26 416 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 GALNT13Q8IUC8 556 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ADHFE1Q8IWW8 467 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 LILRA2Q8N149 483 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MYO1HQ8N1T3 1032 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 OVCA2Q8WZ82 227 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 KLHDC7BQ96G42 594 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 AHCYL2Q96HN2 611 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 MAELQ96JY0 434 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 PRAP1Q96NZ9 151 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 VAT1Q99536 393 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TMEM120AQ9BXJ8 343 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SAP130Q9H0E3 1048 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MID1IP1Q9NPA3 183 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 IL17CQ9P0M4 197 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 IGSF9Q9P2J2 1179 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RCOR3Q9P2K3 495 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 CNOT11Q9UKZ1 510 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 RAB23Q9ULC3 237 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PCDHGA10Q9Y5H3 936 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PLXNB3Q9ULL4 1909 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 A0A1B0GTL3 188 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RGSL1A5PLK6 1076 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 FPGTO14772 594 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 BIRC5O15392 142 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SPINT1O43278 529 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 GPC4O75487 556 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 FGF19O95750 216 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 AGR2O95994 175 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ASLP04424 464 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SERPINA6P08185 405 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SLC35G4P0C7Q5 338 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 DDX6P26196 483 aaKnown RBP eCLIP4.82□□□□□ -1.64
CAST-201ENST00000309190 HTR1BP28222 390 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PCSK6P29122 969 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 HOXA9P31269 272 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SERPINB5P36952 375 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MASP1P48740 699 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 HCAR3P49019 387 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 IL2P60568 153 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RAPSNQ13702 412 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 KCNC3Q14003 757 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 KCNAB1Q14722 419 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TAF11Q15544 211 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 FXNQ16595 210 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 LIN52Q52LA3 116 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PHF19Q5T6S3 580 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 UBE2R2Q712K3 238 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 C11orf74Q86VG3 221 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 NRSN1Q8IZ57 195 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CPSF7Q8N684 471 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 C1QTNF1Q9BXJ1 281 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 EBPLQ9BY08 206 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 STN1Q9H668 368 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 PDFQ9HBH1 243 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 NMRAL1Q9HBL8 299 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 THAP10Q9P2Z0 257 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 APOBEC3BQ9UH17 382 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 PADI4Q9UM07 663 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ZFR2Q9UPR6 939 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 HS3ST2Q9Y278 367 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 KALRNO60229 2985 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms