RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 DNAJB5O75953 348 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ALPLP05186 524 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 TIE1P35590 1138 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ERVPABLB-1P60509 514 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 NFKB2Q00653 900 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 CACNG1Q06432 222 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 TP53BP2Q13625 1128 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 TMEM40Q8WWA1 233 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 RPL3LQ92901 407 aaKnown RBP13.17□□□□□ -0.3
SEC23A-201ENST00000307712 SLC38A4Q969I6 547 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 FUBP1Q96AE4 644 aaKnown RBP13.17□□□□□ -0.3
SEC23A-201ENST00000307712 TMCO6Q96DC7 493 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
SEC23A-201ENST00000307712 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 TLR6Q9Y2C9 796 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 VIPP01282 170 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 FYNP06241 537 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 PRPS2P11908 318 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 NNMTP40261 264 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 GSTM5P46439 218 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 GABARAPL2P60520 117 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ABHD18Q0P651 414 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 DUSP4Q13115 394 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ATL1Q8WXF7 558 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 COPS8Q99627 209 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 NMUR1Q9HB89 426 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 PCTPQ9UKL6 214 aa13.17□□□□□ -0.3
SEC23A-201ENST00000307712 ZFP37Q9Y6Q3 630 aaPredicted RBP13.17□□□□□ -0.3
SEC23A-201ENST00000307712 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CKMP06732 381 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ITGA2P17301 1181 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ARNTP27540 789 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 IDUAP35475 653 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CD83Q01151 205 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 GSTM4Q03013 218 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CERS6Q6ZMG9 384 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 C11orf65Q8NCR3 313 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 TMEM159Q96B96 161 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 TEX37Q96LM6 180 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 YME1L1Q96TA2 773 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 MTERF1Q99551 399 aaKnown RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ACOX3O15254 700 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 TALDO1P37837 337 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ABRQ12979 859 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 DSC3Q14574 896 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 PLA2G4EQ3MJ16 856 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 MZT2BQ6NZ67 158 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 TRIM48Q8IWZ4 208 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 RNFT2Q96EX2 444 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 HSH2DQ96JZ2 352 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 GFM1Q96RP9 751 aaKnown RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 INTS6Q9UL03 887 aaKnown RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 PADI3Q9ULW8 664 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 GSTK1Q9Y2Q3 226 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 PCDHGB3Q9Y5G1 929 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ALDH2P05091 517 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 EPORP19235 508 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CSNK2BP67870 215 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 FAM189BP81408 668 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CHIT1Q13231 466 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 LETMD1Q6P1Q0 360 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 KDELC1Q6UW63 502 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 ZNF517Q6ZMY9 492 aaPredicted RBP13.16□□□□□ -0.3
SEC23A-201ENST00000307712 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 BEX2Q9BXY8 128 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 TBC1D14Q9P2M4 693 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 MALT1Q9UDY8 824 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 CFL2Q9Y281 166 aa13.16□□□□□ -0.3
SEC23A-201ENST00000307712 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 M0QX08 132 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PLOD3O60568 738 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ADAM23O75077 832 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 TSTQ16762 297 aaKnown RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 CDH24Q86UP0 819 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 RGL4Q8IZJ4 473 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 CADM3Q8N126 398 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 OR4A15Q8NGL6 344 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PROKR1Q8TCW9 393 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 TIGARQ9NQ88 270 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 NME7Q9Y5B8 376 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PRR23D1E9PI22 279 aaPredicted RBP13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ADAMDEC1O15204 470 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 ITGB1P05556 798 aa13.15□□□□□ -0.3
SEC23A-201ENST00000307712 PRR23D2P0DMB1 279 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms