RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CTBSQ01459 385 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 RPL6Q02878 288 aaKnown RBP17.02■□□□□ 0.32
KRT28-201ENST00000306658 SIGLEC14Q08ET2 396 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 UBAP2LQ14157 1087 aaKnown RBP17.02■□□□□ 0.32
KRT28-201ENST00000306658 ARHGAP19Q14CB8 494 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 ALG11Q2TAA5 492 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 GGTA1PQ4G0N0 100 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 LARP4Q71RC2 724 aaKnown RBP eCLIP17.02■□□□□ 0.32
KRT28-201ENST00000306658 DCP2Q8IU60 420 aaKnown RBP17.02■□□□□ 0.32
KRT28-201ENST00000306658 HID1Q8IV36 788 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 RAB42Q8N4Z0 105 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 KLHDC7BQ96G42 594 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 NSL1Q96IY1 281 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 C3orf30Q96M34 536 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 INSM2Q96T92 566 aaPredicted RBP17.02■□□□□ 0.32
KRT28-201ENST00000306658 ORAI3Q9BRQ5 295 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 SLC29A3Q9BZD2 475 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 RIC8BQ9NVN3 520 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 POLG2Q9UHN1 485 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 INVSQ9Y283 1065 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 RNF11Q9Y3C5 154 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 CFAP20Q9Y6A4 193 aaKnown RBP17.02■□□□□ 0.32
KRT28-201ENST00000306658 KCNE2Q9Y6J6 123 aa17.02■□□□□ 0.32
KRT28-201ENST00000306658 SPTY2D1-AS1A0A0U1RR47 76 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 ATP6AP2A0A1C7CYW4 349 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CLGNO14967 610 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 UBDO15205 165 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 MAP3K13O43283 966 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 DCXO43602 365 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 UGDHO60701 494 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 HNRNPCL1O60812 293 aaKnown RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 ATP6AP2O75787 350 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 RASGRP1O95267 797 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 AOC1P19801 751 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CCND1P24385 295 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 ADSLP30566 484 aaPredicted RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 SCTRP47872 440 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 RASSF2P50749 326 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PRKG2Q13237 762 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 KRT33BQ14525 404 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SPRED3Q2MJR0 410 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 IL27RAQ6UWB1 636 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 WASH2PQ6VEQ5 465 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SLC22A18ASQ8N1D0 253 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 L3MBTL4Q8NA19 623 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PPFIBP2Q8ND30 876 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 TUBGCP3Q96CW5 907 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 AKTIPQ9H8T0 292 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 WASH6PQ9NQA3 447 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 IMP3Q9NV31 184 aaKnown RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 GPRC5BQ9NZH0 403 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 HEBP2Q9Y5Z4 205 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PRR5-ARHGAP8B1AHC4 643 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 E7ENX8 843 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SCAMP1O15126 338 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SLC22A2O15244 555 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PI15O43692 258 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 ULK1O75385 1050 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CBX6O95503 412 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 KRT6AP02538 564 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 KRT6BP04259 564 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 GNAZP19086 355 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 KRT6CP48668 564 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 TBPL1P62380 186 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 IRF8Q02556 426 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 TAP2Q03519 686 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PCDH1Q08174 1060 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 GRB7Q14451 532 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CLCA4Q14CN2 919 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 LIPJQ5W064 366 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 RNF165Q6ZSG1 346 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CHSY3Q70JA7 882 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CPSF7Q8N684 471 aaKnown RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 SETD7Q8WTS6 366 aaKnown RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 MIPEPQ99797 713 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SGPP1Q9BX95 441 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 TMEM168Q9H0V1 697 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 MVB12BQ9H7P6 319 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CCDC177Q9NQR7 707 aaPredicted RBP17.01■□□□□ 0.31
KRT28-201ENST00000306658 PRDM8Q9NQV8 689 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 GPR27Q9NS67 375 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 ARL8BQ9NVJ2 186 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SPATA7Q9P0W8 599 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 SNX6Q9UNH7 406 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 PTGDR2Q9Y5Y4 395 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 CAPN7Q9Y6W3 813 aa17.01■□□□□ 0.31
KRT28-201ENST00000306658 GON4LQ3T8J9 2241 aa17■□□□□ 0.31
KRT28-201ENST00000306658 MEI4A8MW99 385 aa17■□□□□ 0.31
KRT28-201ENST00000306658 KDM1AO60341 852 aa17■□□□□ 0.31
KRT28-201ENST00000306658 T-ENOLP0DO92 83 aa17■□□□□ 0.31
KRT28-201ENST00000306658 ESRRAP11474 423 aaPredicted RBP17■□□□□ 0.31
KRT28-201ENST00000306658 LBPP18428 481 aa17■□□□□ 0.31
KRT28-201ENST00000306658 CALB2P22676 271 aa17■□□□□ 0.31
KRT28-201ENST00000306658 ILF3Q12906 894 aaKnown RBP eCLIP17■□□□□ 0.31
KRT28-201ENST00000306658 CHIT1Q13231 466 aa17■□□□□ 0.31
KRT28-201ENST00000306658 XKR7Q5GH72 579 aa17■□□□□ 0.31
KRT28-201ENST00000306658 FAM219BQ5XKK7 198 aa17■□□□□ 0.31
KRT28-201ENST00000306658 TMEM198Q66K66 360 aa17■□□□□ 0.31
KRT28-201ENST00000306658 ABRAXAS1Q6UWZ7 409 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms