RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 HAS3O00219 553 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 FBP2O00757 339 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 LSM1O15116 133 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 GPX3P22352 226 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 PTPN5P54829 565 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 LARP4Q71RC2 724 aaKnown RBP eCLIP12.99□□□□□ -0.331e-6■□□□□ 11.1
DDX54-201ENST00000306014 ZNF598Q86UK7 904 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 RAVER1Q8IY67 606 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 KRTCAP2Q8N6L1 136 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ZMIZ2Q8NF64 920 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 C1orf74Q96LT6 269 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ZNF641Q96N77 438 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 POLE4Q9NR33 117 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 KIAA1522Q9P206 1035 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 AP2A2O94973 939 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 INMTO95050 263 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 GRIA2P42262 883 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 MAP2K4P45985 399 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ATAD3BQ5T9A4 648 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 MZT2BQ6NZ67 158 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 RAB43Q86YS6 212 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 C8orf48Q96LL4 319 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 CNPPD1Q9BV87 410 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 SPRTNQ9H040 489 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 TMLHEQ9NVH6 421 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 SLC22A14Q9Y267 594 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 MRPS7Q9Y2R9 242 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 FADS2P1A8MWK0 482 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 MANBAO00462 879 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ERAL1O75616 437 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 SERPINI2O75830 405 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 PCDH8O95206 1070 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 CCNDBP1O95273 360 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 IFNW1P05000 195 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 DGKEP52429 567 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 CHRNA6Q15825 494 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 PSAPL1Q6NUJ1 521 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ADGRG5Q8IZF4 528 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 UBE2E3Q969T4 207 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 PGAP3Q96FM1 320 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 TUBA1CQ9BQE3 449 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 FUNDC2Q9BWH2 189 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 DNAJC25-GNG10A0A024R161 153 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 SLC28A2O43868 658 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 MTX2O75431 263 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 PRPS1L1P21108 318 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 BUD31P41223 144 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 SRP54P61011 504 aaKnown RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 ABHD18Q0P651 414 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 GRM2Q14416 872 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 C11orf91Q3C1V1 193 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 KANK2Q63ZY3 851 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 RAET1GQ6H3X3 334 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ENPP6Q6UWR7 440 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 CACTIN-AS1Q8N1I8 211 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 KRT78Q8N1N4 520 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 METTL25Q8N6Q8 603 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ARL14EPQ8N8R7 260 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 IPCEF1Q8WWN9 437 aaPredicted RBP12.99□□□□□ -0.33
DDX54-201ENST00000306014 DPF3Q92784 378 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 DIRAS2Q96HU8 199 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 DMRTB1Q96MA1 342 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 CORO1BQ9BR76 489 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 FAIMQ9NVQ4 179 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ASF1AQ9Y294 204 aa12.99□□□□□ -0.33
DDX54-201ENST00000306014 ILVBLA1L0T0 632 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 NOS3P29474 1203 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 IFNGR2P38484 337 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 HTR6P50406 440 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CYP4F8P98187 520 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 GRB14Q14449 540 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 DSC3Q14574 896 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 ZBTB6Q15916 424 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 IFI44LQ53G44 452 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 TMPRSS11AQ6ZMR5 421 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 COLGALT2Q8IYK4 626 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 GOLM1Q8NBJ4 401 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 OR10G2Q8NGC3 310 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 FCGR1BQ92637 280 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 ZNF347Q96SE7 839 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 NPLQ9BXD5 320 aaPredicted RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 KRCC1Q9NPI7 259 aaPredicted RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 RUVBL1Q9Y265 456 aaKnown RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 PCDHGB3Q9Y5G1 929 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 TRAV19A0A0A6YYK7 116 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 CLDN7O95471 211 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 ZNF26P17031 533 aaPredicted RBP12.98□□□□□ -0.33
DDX54-201ENST00000306014 PCSK6P29122 969 aa12.98□□□□□ -0.33
DDX54-201ENST00000306014 PRDX3P30048 256 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms