RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TTLL9Q3SXZ7 439 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 FAM109BQ6ICB4 259 aaPredicted RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 SULT1C3Q6IMI6 304 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 EFL1Q7Z2Z2 1120 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 SLC35B4Q969S0 331 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 ARMC5Q96C12 935 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 HEPHQ9BQS7 1158 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 WRAP53Q9BUR4 548 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 ADI1Q9BV57 179 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 NANOGQ9H9S0 305 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 TRNAU1APQ9NX07 287 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 ABCD2Q9UBJ2 740 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 WDR37Q9Y2I8 494 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 PPIL1Q9Y3C6 166 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 DLGAP1O14490 977 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 INPP4BO15327 924 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 HLA-EP13747 358 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 EPB42P16452 691 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 GSK3BP49841 420 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 LIPEQ05469 1076 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 TRAP1Q12931 704 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 PDCD4Q53EL6 469 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 DNAJC14Q6Y2X3 702 aaPredicted RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 KRTCAP2Q8N6L1 136 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 FAM83DQ9H4H8 585 aa21.4■■□□□ 1.02
TPM4-201ENST00000300933 MRPL40Q9NQ50 206 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 MRPS23Q9Y3D9 190 aaKnown RBP21.4■■□□□ 1.02
TPM4-201ENST00000300933 ULK1O75385 1050 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 OR56A5P0C7T3 313 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 ATP1B2P14415 290 aaPredicted RBP21.39■■□□□ 1.01
TPM4-201ENST00000300933 TIMP2P16035 220 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 EPORP19235 508 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 AOAHP28039 575 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 TBCELQ5QJ74 424 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 RGL4Q8IZJ4 473 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 OR2T34Q8NGX1 318 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 OR2T3Q8NH03 318 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 ABHD8Q96I13 439 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 P2RY13Q9BPV8 354 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 ALG2Q9H553 416 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 SOX17Q9H6I2 414 aaPredicted RBP21.39■■□□□ 1.01
TPM4-201ENST00000300933 ACTR8Q9H981 624 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 CCL27Q9Y4X3 112 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 OTOL1A6NHN0 477 aaPredicted RBP21.39■■□□□ 1.01
TPM4-201ENST00000300933 FADS2P1A8MWK0 482 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 UPK3BL1B0FP48 263 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 UPK3BL2E5RIL1 263 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 ADAM23O75077 832 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 SEC22BO75396 215 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 HSPA8P11142 646 aaKnown RBP21.39■■□□□ 1.01
TPM4-201ENST00000300933 ZNF182P17025 639 aaPredicted RBP21.39■■□□□ 1.01
TPM4-201ENST00000300933 HALP42357 657 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 PRKG2Q13237 762 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 DHCR24Q15392 516 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 EPHX4Q8IUS5 362 aa21.39■■□□□ 1.01
TPM4-201ENST00000300933 HELZP42694 1942 aaKnown RBP21.38■■□□□ 1.01
TPM4-201ENST00000300933 ARPC2O15144 300 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 BCAP31P51572 246 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 MERTKQ12866 999 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 PRSS36Q5K4E3 855 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 ANKFN1Q8N957 763 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 ELMO1Q92556 727 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 UHRF1Q96T88 793 aaPredicted RBP21.38■■□□□ 1.01
TPM4-201ENST00000300933 CARNS1A5YM72 827 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 ANXA5P08758 320 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 BMXP51813 675 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 POLR2LP62875 67 aaKnown RBP21.38■■□□□ 1.01
TPM4-201ENST00000300933 ABRQ12979 859 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 PPIGQ13427 754 aaKnown RBP eCLIP21.38■■□□□ 1.01
TPM4-201ENST00000300933 CEP44Q9C0F1 390 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 LEF1Q9UJU2 399 aaPredicted RBP21.38■■□□□ 1.01
TPM4-201ENST00000300933 CDH7Q9ULB5 785 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 SLC22A14Q9Y267 594 aa21.38■■□□□ 1.01
TPM4-201ENST00000300933 FAM234BA2RU67 622 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 KPNA3O00505 521 aaPredicted RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 EEDO75530 441 aaKnown RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 B3GALT4O96024 378 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 XPAP23025 273 aaPredicted RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 SLC6A11P48066 632 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 EMX2Q04743 252 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 CD300CQ08708 224 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 IMPG1Q17R60 797 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 PTCHD3Q3KNS1 767 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 ERMP1Q7Z2K6 904 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 ADGRD2Q7Z7M1 963 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 ZFAND4Q86XD8 727 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 LMNTD1Q8N9Z9 388 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 TANKQ92844 425 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 NXPE3Q969Y0 559 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 TUBA8Q9NY65 449 aaPredicted RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 CORINQ9Y5Q5 1042 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 PRUNE2Q8WUY3 3088 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 WDR47O94967 919 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 BMP2P12643 396 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 PBLDP30039 288 aaPredicted RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 PREPP48147 710 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 KCTD8Q6ZWB6 473 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 LIX1Q8N485 282 aa21.37■■□□□ 1.01
TPM4-201ENST00000300933 KCTD14Q9BQ13 255 aaPredicted RBP21.37■■□□□ 1.01
TPM4-201ENST00000300933 PKD2L2Q9NZM6 624 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms