RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 MAP2K7O14733 419 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 RNF13O43567 381 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 CDC123O75794 336 aaPredicted RBP12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 CER1O95813 267 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 PDYNP01213 254 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 NCK1P16333 377 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 CRISP1P54107 249 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 LIPMQ5VYY2 423 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 EEF1DP3Q658K8 133 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 HLA-CQ95604 372 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 TDRD1Q9BXT4 1180 aaKnown RBP12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 SPAG4Q9NPE6 437 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 COL5A2P05997 1499 aaPredicted RBP12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 CBLP22681 906 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 VSX2P58304 361 aaPredicted RBP12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 TIGD6Q17RP2 521 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 ZNF709Q8N972 641 aa12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 NSUN3Q9H649 340 aaKnown RBP12.96□□□□□ -0.34
PLXNB1-201ENST00000296440 FTCDNL1E5RQL4 147 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 MEN1O00255 615 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ZNF217O75362 1048 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 TACSTD2P09758 323 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 RPS21P63220 83 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 CLNKQ7Z7G1 428 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ARL8BQ9NVJ2 186 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PDP2Q9P2J9 529 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 DUXAA6NLW8 204 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 H3BSH0 61 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 IFNW1P05000 195 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 HNRNPKP61978 463 aaKnown RBP eCLIP12.95□□□□□ -0.342e-7■■■□□ 19.1
PLXNB1-201ENST00000296440 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ZNF676Q8N7Q3 588 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 OR7A2PQ8NGA2 310 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 UBIAD1Q9Y5Z9 338 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 H3BQ06 376 aaPredicted RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 AHSA1O95433 338 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 CYP3A5P20815 502 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 SPATC1Q76KD6 591 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ZNF808Q8N4W9 903 aaPredicted RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 RTKNQ9BST9 563 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 IL23AQ9NPF7 189 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 BRINP1O60477 761 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PROCP04070 461 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 HERV-K104P61576 105 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 AUHQ13825 339 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PDK4Q16654 411 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LRIF1Q5T3J3 769 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 RAD9BQ6WBX8 426 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LDB1Q86U70 411 aaPredicted RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PTCD3Q96EY7 689 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ARL5BQ96KC2 179 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 CCM2Q9BSQ5 444 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 CCDC86Q9H6F5 360 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 IPPKQ9H8X2 491 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 FARSBQ9NSD9 589 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LOC102723532A0A0G2JNH3 316 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 M0R2N6 131 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 GSTT2P0CG29 244 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 GSTT2BP0CG30 244 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ICAM3P32942 547 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 SEC24CP53992 1094 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PRAMEF14Q5SWL7 426 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PRAMEF13Q5VWM6 474 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 Q6ZVU0 165 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 SPATA19Q7Z5L4 167 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 AMER2Q8N7J2 671 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 TMEM161BQ8NDZ6 487 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LMAN1LQ9HAT1 526 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 ZCCHC17Q9NP64 241 aaKnown RBP12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 SLC7A11Q9UPY5 501 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 GNAZP19086 355 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 AP3S2P59780 193 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 LIPEQ05469 1076 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 NR0B2Q15466 257 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 FAM131AQ6UXB0 335 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 TBX5Q99593 518 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 PCDHGB2Q9Y5G2 931 aa12.95□□□□□ -0.34
PLXNB1-201ENST00000296440 EFNA1P20827 205 aaPredicted RBP12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 TRMT5Q32P41 509 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 KLHL15Q96M94 604 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 TMLHEQ9NVH6 421 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 IRAK2O43187 625 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 YAP1P46937 504 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 LYSMD4Q5XG99 296 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 ZNF613Q6PF04 617 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 KBTBD2Q8IY47 623 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 SNIP1Q8TAD8 396 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 NANOS1Q8WY41 292 aaKnown RBP12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 NUDT4Q9NZJ9 180 aa12.94□□□□□ -0.34
PLXNB1-201ENST00000296440 BAZ2BQ9UIF8 2168 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms