RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ZIC5Q96T25 663 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 CGREF1Q99674 301 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 WDR83Q9BRX9 315 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 FAIM2Q9BWQ8 316 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 CCNB1IP1Q9NPC3 277 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SNX6Q9UNH7 406 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SRCAPQ6ZRS2 3230 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 H0YC42 278 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 BEST1O76090 585 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SSR2P43308 183 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 AGTR2P50052 363 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 NIPAL4Q0D2K0 466 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 TXNDC11Q6PKC3 985 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 FBXL12Q9NXK8 326 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 DNAJB9Q9UBS3 223 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 C7orf72A4D263 438 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 OR10H3O60404 316 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 IFI30P13284 250 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SPAM1P38567 509 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 BIKQ13323 160 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 ENPP7Q6UWV6 458 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 SPNS2Q8IVW8 549 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 C7orf57Q8NEG2 295 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 INTS7Q9NVH2 962 aaKnown RBP13.16□□□□□ -0.3
HPS3-201ENST00000296051 WDR37Q9Y2I8 494 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 LYVE1Q9Y5Y7 322 aa13.16□□□□□ -0.3
HPS3-201ENST00000296051 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 SMIM30A4D0T7 59 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 IL4RP24394 825 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 KIR3DL1P43629 444 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 BMXP51813 675 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 TBC1D25Q3MII6 688 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 FAM46DQ8NEK8 389 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 ITCHQ96J02 903 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 FCRL5Q96RD9 977 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 MKS1Q9NXB0 559 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 CRNNQ9UBG3 495 aaPredicted RBP13.15□□□□□ -0.3
HPS3-201ENST00000296051 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
HPS3-201ENST00000296051 GMEB1Q9Y692 573 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 VILLO15195 856 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 INSIG1O15503 277 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 SLC7A4O43246 635 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 ECI2O75521 394 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 RFPL2O75678 378 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 GABBR2O75899 941 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 BLKP51451 505 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 PTPN5P54829 565 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 AP1S1P61966 158 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 RELAQ04206 551 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 GNA13Q14344 377 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 QPRTQ15274 297 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 RNASE12Q5GAN4 147 aaKnown RBP13.15□□□□□ -0.3
HPS3-201ENST00000296051 LYPLAL1Q5VWZ2 237 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 KDM1BQ8NB78 822 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 PYCR2Q96C36 320 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 UGT2B11O75310 529 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 TULP3O75386 442 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 G6PDP11413 515 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 MAP2K4P45985 399 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 RAB25P57735 213 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 NANOGP8Q6NSW7 305 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 Q6ZVU0 165 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 SLC7A5P1Q8MH63 180 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
HPS3-201ENST00000296051 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 NANOGQ9H9S0 305 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 NCDNQ9UBB6 729 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 MKL2Q9ULH7 1088 aa13.15□□□□□ -0.3
HPS3-201ENST00000296051 A0A1W2PP18 115 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 AP2A2O94973 939 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 ZNF865P0CJ78 1059 aaPredicted RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 GJA5P36382 358 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 INHBCP55103 352 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 RPS3AP61247 264 aaKnown RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.15□□□□□ -0.31
HPS3-201ENST00000296051 NAE1Q13564 534 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 ARSIQ5FYB1 569 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 CST9Q5W186 159 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 PDE12Q6L8Q7 609 aaKnown RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 ZNF773Q6PK81 442 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 TMEM135Q86UB9 458 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 OSTM1Q86WC4 334 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 CARS2Q9HA77 564 aaKnown RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 CCM2LQ9NUG4 571 aaPredicted RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 FAIMQ9NVQ4 179 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 CLN6Q9NWW5 311 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.31
HPS3-201ENST00000296051 MAGED1Q9Y5V3 778 aaPredicted RBP13.15□□□□□ -0.31
HPS3-201ENST00000296051 CEPT1Q9Y6K0 416 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms