RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FOXJ1Q92949 421 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PNO1Q9NRX1 252 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 GDE1Q9NZC3 331 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 G3V2T6 193 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 RNGTTO60942 597 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 COX10Q12887 443 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARHGAP40Q5TG30 622 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM91A1Q658Y4 838 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZDHHC24Q6UX98 284 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 OAFQ86UD1 273 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 CLVS1Q8IUQ0 354 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 TOP1MTQ969P6 601 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 DGAT2Q96PD7 388 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 COQ7Q99807 217 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 C6orf62Q9GZU0 229 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 ATXN2Q99700 1313 aaKnown RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMCC2O75069 709 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 REM1O75628 298 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRAF3Q13114 568 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 DGUOKQ16854 277 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 EIPR1Q53HC9 387 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 HIPK1Q86Z02 1210 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 OR9A1PQ8NGU1 263 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 KIAA1143Q96AT1 154 aaPredicted RBP17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRAPPC9Q96Q05 1148 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 FIZ1Q96SL8 496 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 DGCR6LQ9BY27 220 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 PHF11Q9UIL8 331 aa17.32■□□□□ 0.36
CDC42EP3-201ENST00000295324 A0A1W2PQU0 124 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMEM189-UBE2V1I3L0A0 370 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 TLX3O43711 291 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 FABP3P05413 133 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 DNAJB1P25685 340 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 DEFB103AP81534 67 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 TCEAL1Q15170 157 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 DCST1Q5T197 706 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARMC4Q5T2S8 1044 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 RTL10Q7L3V2 364 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 KCNJ9Q92806 393 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 ARHGEF3Q9NR81 526 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 COL16A1Q07092 1604 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 CAPN14A8MX76 684 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 EPCAMP16422 314 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PLEKHS1Q5SXH7 462 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 BROXQ5VW32 411 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 RSBN1Q5VWQ0 802 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 TRAM1L1Q8N609 369 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 RNASE11Q8TAA1 199 aaKnown RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PEX13Q92968 403 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 GALNT8Q9NY28 637 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 LCHNA4D1U4 455 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 SAP18O00422 153 aaKnown RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF217O75362 1048 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 NAIF1Q69YI7 327 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 TXNDC5Q8NBS9 432 aaKnown RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 OMA1Q96E52 524 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PIWIL1Q96J94 861 aaKnown RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 CCNB1IP1Q9NPC3 277 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 C8orf4Q9NR00 106 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PPM1HQ9ULR3 514 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 CRISP3P54108 245 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 IRF9Q00978 393 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 SCAPQ12770 1279 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PTGES3Q15185 160 aaKnown RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 HKDC1Q2TB90 917 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF572Q7Z3I7 529 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 CILP2Q8IUL8 1156 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 GLYATL1Q969I3 302 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 LENG8Q96PV6 779 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 C19orf25Q9UFG5 118 aaPredicted RBP17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 PCDHB3Q9Y5E6 796 aa17.31■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM221BA6H8Z2 402 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TCEA3O75764 348 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ANPEPP15144 967 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 SPANXN2Q5MJ10 180 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 OR2T34Q8NGX1 318 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 OR2T3Q8NH03 318 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 GPR22Q99680 433 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 DERL2Q9GZP9 239 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 NUP98P52948 1817 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ALOX5P09917 674 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 CLCN7P51798 805 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 PAOXQ6QHF9 649 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 EEF1AKMT1Q8WVE0 214 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 IMP4Q96G21 291 aaKnown RBP17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ALG2Q9H553 416 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 OGDHLQ9ULD0 1010 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 AGR2O95994 175 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 HNF1BP35680 557 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 REP15Q6BDI9 236 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 MZT2AQ6P582 158 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TMIGD1Q6UXZ0 262 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 A8MT66 165 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FADS2P1A8MWK0 482 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 FAM72CH0Y354 149 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 TNFRSF11BO00300 401 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ENTPD5O75356 428 aa17.3■□□□□ 0.36
CDC42EP3-201ENST00000295324 ZNF37AP17032 561 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms