RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PRPS2P11908 318 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 DNAJA1P31689 397 aaKnown RBP15.02■□□□□ -0
SHROOM4-201ENST00000289292 PTGER3P43115 390 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 TXNL4AP83876 142 aaKnown RBP15.02■□□□□ -0
SHROOM4-201ENST00000289292 PLEKHG6Q3KR16 790 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 CCSAPQ6IQ19 270 aaPredicted RBP15.02■□□□□ -0
SHROOM4-201ENST00000289292 PRSS55Q6UWB4 352 aaPredicted RBP15.02■□□□□ -0
SHROOM4-201ENST00000289292 EBF1Q9UH73 591 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 MTX2O75431 263 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 HNRNPDQ14103 355 aaKnown RBP15.02■□□□□ -0
SHROOM4-201ENST00000289292 LGI4Q8N135 537 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 TNFAIP8L1Q8WVP5 186 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 SLC38A4Q969I6 547 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 SLC22A4Q9H015 551 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 FZD8Q9H461 694 aa15.02■□□□□ -0
SHROOM4-201ENST00000289292 RIIAD1A6NNX1 92 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 GABRDO14764 452 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 XPNPEP2O43895 674 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 HCN1O60741 890 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 HOXB6P17509 224 aaKnown RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CYP3A5P20815 502 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 PTNP21246 168 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 RYKP34925 604 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 AGTR2P50052 363 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 XKP51811 444 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 FAM91A1Q658Y4 838 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 TMEM220Q6QAJ8 160 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 GOLGA7Q7Z5G4 137 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CAND1Q86VP6 1230 aaKnown RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF641Q96N77 438 aaPredicted RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 TSPAN18Q96SJ8 248 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 MSCO60682 206 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF432O94892 652 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 TCEA1P23193 301 aaKnown RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CLCN4P51793 760 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 ARFIP1P53367 373 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 RHDQ02161 417 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 IQCHQ86VS3 1027 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 TMEM130Q8N3G9 435 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CNIH3Q8TBE1 160 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 OR8D1Q8WZ84 308 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 PKP4Q99569 1192 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CDADC1Q9BWV3 514 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 K7EPI3 171 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 SNAP29O95721 258 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 PLA2G16P53816 162 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 MC1RQ01726 317 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 RPL6Q02878 288 aaKnown RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 GALNT12Q8IXK2 581 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 ATP6V1C2Q8NEY4 427 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 OR4F6Q8NGB9 312 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 SLC35A5Q9BS91 424 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 CCDC177Q9NQR7 707 aaPredicted RBP15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 AKAP12Q02952 1782 aa15.02□□□□□ -0.01
SHROOM4-201ENST00000289292 URADA6NGE7 173 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ESR1P03372 595 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ACVRL1P37023 503 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 JAG1P78504 1218 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 DSC3Q14574 896 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 CERS6Q6ZMG9 384 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 CHST4Q8NCG5 386 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 H3BSH0 61 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 PMM2O15305 246 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 USP2O75604 605 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 PLPP4Q5VZY2 271 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 SMYD5Q6GMV2 418 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 DLK2Q6UY11 383 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF517Q6ZMY9 492 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 PRR23BQ6ZRT6 265 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ARL14EPQ8N8R7 260 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 MFSD1Q9H3U5 465 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 RHCGQ9UBD6 479 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF214Q9UL59 606 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 BAZ2AQ9UIF9 1905 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 CLIC1O00299 241 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 KERAO60938 352 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 TGFB1P01137 390 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 RPL26P61254 145 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 LARS2Q15031 903 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 TIGD5Q53EQ6 642 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 METTL3Q86U44 580 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 TXNDC5Q8NBS9 432 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 FCGR1BQ92637 280 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ANKRA2Q9H9E1 313 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 AKAP7Q9P0M2 348 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 I3L521 148 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 MTRF1O75570 445 aaKnown RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 FCER2P06734 321 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 YBEYP58557 167 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 SNAP47Q5SQN1 464 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 NFKBIDQ8NI38 313 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 PMM1Q92871 262 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ACTR3BQ9P1U1 418 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 TLR4O00206 839 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 PCDH7O60245 1069 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 SOX14O95416 240 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 ZNF24P17028 368 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 MAN2A2P49641 1150 aa15.01□□□□□ -0.01
SHROOM4-201ENST00000289292 GRB14Q14449 540 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms