RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ZNF451Q9Y4E5 1061 aa17.17■□□□□ 0.34
PCDHA13-201ENST00000289272 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 E9PAM4 449 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 DLX3O60479 287 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 TOP3BO95985 862 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 MT-ND1P03886 318 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 PRPS1L1P21108 318 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 VARSP26640 1264 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 SLC1A2P43004 574 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 SP2Q02086 613 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 MINDY1Q8N5J2 469 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 RNASE11Q8TAA1 199 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 EXOC2Q96KP1 924 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 APOLD1Q96LR9 279 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 HAPLN3Q96S86 360 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 GPR21Q99679 349 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 CKLFQ9UBR5 152 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 KANTRA0A1W2PQU2 76 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 NUAK1O60285 661 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 CTSEP14091 401 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 LMO2P25791 158 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 CD83Q01151 205 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 HSPA14Q0VDF9 509 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 OXR1Q8N573 874 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 PCED1BQ96HM7 432 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 ARMC1Q9NVT9 282 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 NKIRAS2Q9NYR9 191 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 HLA-DPB1P04440 258 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 C8GP07360 202 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF24P17028 368 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 KELP23276 732 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 HTR1BP28222 390 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 GPR1P46091 355 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 NOVP48745 357 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 UGT2A3Q6UWM9 527 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 BRSK1Q8TDC3 778 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 MAGIXQ9H6Y5 334 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 FBXW11Q9UKB1 542 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 STYXL1Q9Y6J8 313 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 MYH6P13533 1939 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 PHRF1Q9P1Y6 1649 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 TCRBV7S3A2A0A539 114 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 OR4F21O95013 312 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 HLA-DQA1Q5Y7H0 255 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 TMEM198Q66K66 360 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 CAPN13Q6MZZ7 669 aaPredicted RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 BAIAP2L2Q6UXY1 529 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 ZC3HC1Q86WB0 502 aaKnown RBP17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 CPA6Q8N4T0 437 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 WDR48Q8TAF3 677 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 FBXL20Q96IG2 436 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 RDH8Q9NYR8 311 aa17.16■□□□□ 0.34
PCDHA13-201ENST00000289272 URADA6NGE7 173 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PPP3R1P63098 170 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 CYP4F8P98187 520 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PGBD2Q6P3X8 592 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF730Q6ZMV8 503 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TAC4Q86UU9 113 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 CEP295NLQ96MC4 621 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 FCRL4Q96PJ5 515 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 BCO2Q9BYV7 579 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 BRD9Q9H8M2 597 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 RC3H2Q9HBD1 1191 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PRORSD1PA6NEY8 169 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 CXCR3P49682 368 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 NDUFV1P49821 464 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 FAM174BQ3ZCQ3 159 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 UTS2BQ765I0 119 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 KIF18BQ86Y91 864 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TOR1AIP2Q8NFQ8 470 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 SETD6Q8TBK2 473 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 GEMIN6Q8WXD5 167 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 AHCYL2Q96HN2 611 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TMEM246Q9BRR3 403 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TM6SF2Q9BZW4 377 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 LRATO95237 230 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 HMGN1P05114 100 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ZNF806P0C7X5 589 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 COL6A1P12109 1028 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 GABRR2P28476 465 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 YAP1P46937 504 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ARHGDIBP52566 201 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ATXN1P54253 815 aaKnown RBP17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 MTPNP58546 118 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 OGDHQ02218 1023 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TOMM5Q8N4H5 51 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 CD99L2Q8TCZ2 262 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ACTR6Q9GZN1 396 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 RIIAD1A6NNX1 92 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 PLD2O14939 933 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 APOC1P02654 83 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ELNP15502 786 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 TNNI3P19429 210 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 CLCNKBP51801 687 aa17.15■□□□□ 0.34
PCDHA13-201ENST00000289272 ESRP1Q6NXG1 681 aaKnown RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms