RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RLN3Q8WXF3 142 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 MAGEB18Q96M61 343 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 HSPA12BQ96MM6 686 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC12A9Q9BXP2 914 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PILRBQ9UKJ0 227 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM114B3SHH9 223 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 STX16-NPEPL1H3BU86 382 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 STX16O14662 325 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 DFNA5O60443 496 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 MTX2O75431 263 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 POP7O75817 140 aaKnown RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 NME1P15531 152 aaKnown RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CYP2A7P20853 494 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 AP1S2P56377 157 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CSHL1Q14406 222 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM31Q5JXX7 168 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CPNE9Q8IYJ1 553 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 KIRREL3Q8IZU9 778 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 MAGEC3Q8TD91 643 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 EEF1AKMT1Q8WVE0 214 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ASB11Q8WXH4 323 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 NXNL1Q96CM4 212 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 L3HYPDHQ96EM0 354 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ATOH8Q96SQ7 321 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 IMP3Q9NV31 184 aaKnown RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 COPG2Q9UBF2 871 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PCDH15Q96QU1 1955 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM202A6NGA9 273 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TLR4O00206 839 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 BCAT2O15382 392 aaPredicted RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 EPN2O95208 641 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CXCR2P25025 360 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ACADLP28330 430 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 HSD17B2P37059 387 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PRIM2P49643 509 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 HNMTP50135 292 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 NME5P56597 212 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 CLDN2P57739 230 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TP53BP2Q13625 1128 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ALG11Q2TAA5 492 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ACSBG2Q5FVE4 666 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TRIM74Q86UV6 250 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR135Q8IZ08 494 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 C2orf73Q8N5S3 287 aaPredicted RBP8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 PDPRQ8NCN5 879 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 ZFPM2Q8WW38 1151 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 GSDMCQ9BYG8 508 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 FGF22Q9HCT0 170 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 SH3BP4Q9P0V3 963 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 AURKCQ9UQB9 309 aa8.22□□□□□ -1.09
PTPDC1-201ENST00000288976 TRPM6Q9BX84 2022 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 LOC100653049A0A140TA62 436 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 G3V2L1 256 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 KATNA1O75449 491 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 KRT34O76011 436 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 CSF2P04141 144 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 BPGMP07738 259 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 MYL2P10916 166 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 TCN1P20061 433 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 ATP5F1P24539 256 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 PRKAG1P54619 331 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 VAC14Q08AM6 782 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 CAPRIN2Q6IMN6 1127 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 ZC3H14Q6PJT7 736 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 IL27RAQ6UWB1 636 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 ENPP7Q6UWV6 458 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 CDHR3Q6ZTQ4 885 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 RBM12BQ8IXT5 1001 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 FRMD1Q8N878 549 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 PLEKHA8Q96JA3 519 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 TEX12Q9BXU0 123 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 ZDHHC5Q9C0B5 715 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 IRF2BPLQ9H1B7 796 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 OXSMQ9NWU1 459 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 CHCHD3Q9NX63 227 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM216Q9P0N5 145 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 SPATA7Q9P0W8 599 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 SIRPGQ9P1W8 387 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 PCDHGA5Q9Y5G8 931 aa8.21□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF839A8K0R7 811 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 IQCF5A8MTL0 148 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MYO1CO00159 1063 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 SBK3P0C264 359 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 TPBGLP0DKB5 382 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 NDUFS1P28331 727 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MDH1P40925 334 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 GABPB1Q06547 395 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PCLAFQ15004 111 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 SBSNQ6UWP8 590 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 OR1E3Q8WZA6 343 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 ATP6V1HQ9UI12 483 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 TEKT2Q9UIF3 430 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 PADI4Q9UM07 663 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 NPEPPSL1A6NEC2 478 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 OR5K4A6NMS3 321 aa8.21□□□□□ -1.1
PTPDC1-201ENST00000288976 MYO1GB0I1T2 1018 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms