RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PGRP06401 933 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 IL10P22301 178 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 MAD2L1Q13257 205 aaPredicted RBP18.77■□□□□ 0.59
BRAF-201ENST00000288602 MAPKAPK3Q16644 382 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 CDKL4Q5MAI5 379 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 ZBTB49Q6ZSB9 765 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 TCAIMQ8N3R3 496 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 GTF2H4Q92759 462 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 LRIG1Q96JA1 1093 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 EGLN2Q96KS0 407 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 Q9H521 79 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 SLC6A13Q9NSD5 602 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 DEC1Q9P2X7 70 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 SLC27A6Q9Y2P4 619 aa18.77■□□□□ 0.59
BRAF-201ENST00000288602 ARHGAP10A1A4S6 786 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 SH3BGRLO75368 114 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 AP2A2O94973 939 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 RB1P06400 928 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 CD22P20273 847 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 NFKBIAP25963 317 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 MAP4P27816 1152 aaKnown RBP18.76■□□□□ 0.59
BRAF-201ENST00000288602 SP140Q13342 867 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 LDLRAP1Q5SW96 308 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 IYDQ6PHW0 289 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 CACUL1Q86Y37 369 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 SNX6Q9UNH7 406 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 IFRD1O00458 451 aaPredicted RBP18.76■□□□□ 0.59
BRAF-201ENST00000288602 MMP20O60882 483 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 ATG13O75143 517 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 NELFEP18615 380 aaKnown RBP18.76■□□□□ 0.59
BRAF-201ENST00000288602 PHC1P78364 1004 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 SF1Q15637 639 aaKnown RBP18.76■□□□□ 0.59
BRAF-201ENST00000288602 GLYATQ6IB77 296 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 ANKRD46Q86W74 232 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 CHCHD4Q8N4Q1 142 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 WFIKKN2Q8TEU8 576 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 BIRC7Q96CA5 298 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 TIFAQ96CG3 184 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 APOLD1Q96LR9 279 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 OR52E6Q96RD3 313 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 CLMPQ9H6B4 373 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 GULP1Q9UBP9 304 aa18.76■□□□□ 0.59
BRAF-201ENST00000288602 NUP210Q8TEM1 1887 aaPredicted RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 DYTNA2CJ06 578 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 E7EQ34 232 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 SLC16A5O15375 505 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 HNRNPRO43390 633 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 RECQL5O94762 991 aaPredicted RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 PGM3O95394 542 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 SOD1P00441 154 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 NPPAP01160 153 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 GSTM1P09488 218 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 PBX2P40425 430 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 AP1S2P56377 157 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 GSTM4Q03013 218 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 NAE1Q13564 534 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 DDX39BQ13838 428 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 GRM2Q14416 872 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 ZNF234Q14588 700 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 ADNP2Q6IQ32 1131 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 CYP2U1Q7Z449 544 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 DTWD1Q8N5C7 304 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 DTD2Q96FN9 168 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 ZNF597Q96LX8 424 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 VPS35Q96QK1 796 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 THUMPD3Q9BV44 507 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 EBPLQ9BY08 206 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 AGPAT4Q9NRZ5 378 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 TMEM45AQ9NWC5 275 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 SLC25A37Q9NYZ2 338 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 CNOT11Q9UKZ1 510 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 PSIP1O75475 530 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 PRNPP04156 253 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 BMP2P12643 396 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 HTR1EP28566 365 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 PRLHRP49683 370 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 RPS14P62263 151 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 MYBPC1Q00872 1141 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 THOC6Q86W42 341 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 EPHX4Q8IUS5 362 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 L3MBTL4Q8NA19 623 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 OR10A6Q8NH74 314 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 AURKBQ96GD4 344 aaPredicted RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 COQ10AQ96MF6 247 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 MTERF1Q99551 399 aaKnown RBP18.75■□□□□ 0.59
BRAF-201ENST00000288602 CCM2Q9BSQ5 444 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 IGFLR1Q9H665 355 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 DPP7Q9UHL4 492 aa18.75■□□□□ 0.59
BRAF-201ENST00000288602 KANSL1LA0AUZ9 987 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 CEP290O15078 2479 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 SLC16A8O95907 504 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 GSNP06396 782 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 PEX19P40855 299 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 IRF8Q02556 426 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 HNRNPA1L2Q32P51 320 aaKnown RBP18.74■□□□□ 0.59
BRAF-201ENST00000288602 XKR6Q5GH73 641 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 RNF165Q6ZSG1 346 aa18.74■□□□□ 0.59
BRAF-201ENST00000288602 MMAAQ8IVH4 418 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms