RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 OR2T11Q8NH01 316 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 RHBDF1Q96CC6 855 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 NTMT1Q9BV86 223 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 WDR12Q9GZL7 423 aaKnown RBP9.81□□□□□ -0.84
HMGCR-201ENST00000287936 GORASP2Q9H8Y8 452 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 PDP1Q9P0J1 537 aaPredicted RBP9.81□□□□□ -0.84
HMGCR-201ENST00000287936 FXYD1O00168 92 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 EFCAB14O75071 495 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 WISP3O95389 354 aaPredicted RBP9.81□□□□□ -0.84
HMGCR-201ENST00000287936 ABCB1P08183 1280 aaPredicted RBP9.81□□□□□ -0.84
HMGCR-201ENST00000287936 ATP1B2P14415 290 aaPredicted RBP9.81□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF30P17039 623 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 KRT20P35900 424 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 CCR3P51677 355 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 DEFB115Q30KQ5 88 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 Q6ZSR9 355 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 TAS1R1Q7RTX1 841 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 SMIM14Q96QK8 99 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 BOCQ9BWV1 1114 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 CRISPLD1Q9H336 500 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 SLC13A4Q9UKG4 626 aa9.81□□□□□ -0.84
HMGCR-201ENST00000287936 LOC100130705A0A1B0GUX0 176 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 SPATA31D3P0C874 917 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 MYCLP1P12525 358 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 SLC5A2P31639 672 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 IFNA8P32881 189 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 GABARAPL2P60520 117 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CNTN1Q12860 1018 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 LMAN2Q12907 356 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TRAF3Q13114 568 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 KCNC3Q14003 757 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PTCHD3Q3KNS1 767 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 SPATA31D4Q6ZUB0 917 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PHYKPLQ8IUZ5 450 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 HEPHQ9BQS7 1158 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 HERC2P3Q9BVR0 1158 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NPLQ9BXD5 320 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 IL26Q9NPH9 171 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 MIEF1Q9NQG6 463 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 FAM120CQ9NX05 1096 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TBC1D14Q9P2M4 693 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 DAPK2Q9UIK4 370 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF229Q9UJW7 825 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PSME2Q9UL46 239 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PCDHGA11Q9Y5H2 935 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NEDD8-MDP1E9PL57 170 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NDUFS2O75306 463 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 RETP07949 1114 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 RRM2P31350 389 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 APLP1P51693 650 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NAE1Q13564 534 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 RAB33AQ14088 237 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CNKSR3Q6P9H4 555 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 DEPDC4Q8N2C3 294 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 UBTD2Q8WUN7 234 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF641Q96N77 438 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 P2RY12Q9H244 342 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PAIP2BQ9ULR5 123 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TMCC3Q9ULS5 477 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PHF24Q9UPV7 400 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TRIM17Q9Y577 477 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 GMEB1Q9Y692 573 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF236Q9UL36 1845 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 KLHL33A6NCF5 533 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF99A8MXY4 864 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 K7ERQ8 282 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CLIC1O00299 241 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 RGS10O43665 173 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CNOT3O75175 753 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 AP2A2O94973 939 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 KLKB1P03952 638 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CRATP43155 626 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 SIM2Q14190 667 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 OR2T5Q6IEZ7 315 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CAPN13Q6MZZ7 669 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 BRAT1Q6PJG6 821 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 GALNT5Q7Z7M9 940 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TRIM69Q86WT6 500 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 OR2T29Q8NH02 315 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 MYDGFQ969H8 173 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CCDC115Q96NT0 180 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 SOX17Q9H6I2 414 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 VPS29Q9UBQ0 182 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ADAM12O43184 909 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NBNO60934 754 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 NTRK1P04629 796 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 GNAO1P09471 354 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PRR35P0CG20 571 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 HK3P52790 923 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CSNK2BP67870 215 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 TEAD4Q15561 434 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 MOGQ16653 247 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 PHKG1Q16816 387 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 ZNF829Q3KNS6 432 aaPredicted RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 LDLRAP1Q5SW96 308 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 OR4F3Q6IEY1 312 aa9.8□□□□□ -0.84
HMGCR-201ENST00000287936 CXorf57Q6NSI4 855 aaKnown RBP9.8□□□□□ -0.84
HMGCR-201ENST00000287936 GDPD4Q6W3E5 623 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms