RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 EDNRAP25101 427 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 DLSTP36957 453 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GRIA2P42262 883 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RARRES1P49788 294 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ADGRE1Q14246 886 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TMEM145Q8NBT3 493 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SRMSQ9H3Y6 488 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GSKIPQ9P0R6 139 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RIMKLBQ9ULI2 386 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 MYO5BQ9ULV0 1848 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 OR6C75A6NL08 312 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 M0R233 179 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 EDF1O60869 148 aaKnown RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 NFATC1O95644 943 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GSTM2P28161 218 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SLC15A1P46059 708 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 COL28A1Q2UY09 1125 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 CCDC28AQ8IWP9 274 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 FBXO15Q8NCQ5 510 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF431Q8TF32 576 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 MFSD3Q96ES6 412 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RIOX1Q9H6W3 641 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PAPSS1O43252 624 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 FMO3P31513 532 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RIN1Q13671 783 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SGCBQ16585 318 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 CHRFAM7AQ494W8 412 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 NOMO2Q5JPE7 1267 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PGM2L1Q6PCE3 622 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 IQCHQ86VS3 1027 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 C12orf40Q86WS4 652 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ZDHHC21Q8IVQ6 265 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 UBE2J2Q8N2K1 259 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PMEPA1Q969W9 287 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GLOD4Q9HC38 313 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ARL8BQ9NVJ2 186 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 POFUT2Q9Y2G5 429 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 OR2AG2A6NM03 316 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 NDST3O95803 873 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 RBMXP38159 391 aaKnown RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TLE3Q04726 772 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SLC8B1Q6J4K2 584 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 BAIAP2L2Q6UXY1 529 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SLC26A9Q7LBE3 791 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 FN3KQ9H479 309 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 IPPKQ9H8X2 491 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 UBE2Q2LH0YL09 131 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GADD45GO95257 159 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ZSCAN5DPP0CG00 497 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 GRIA1P42261 906 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ACADVLP49748 655 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 SEC23BQ15437 767 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TOP6BLQ8N6T0 577 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 TXN2Q99757 166 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PBDC1Q9BVG4 233 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 POLR2J2Q9GZM3 115 aaKnown RBP8.57□□□□□ -1.04
NIPBL-201ENST00000282516 PCDHGA8Q9Y5G5 932 aa8.57□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF670-ZNF695F2Z2N8 137 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TPST2O60704 377 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 H6PDO95479 791 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 THEGLP0DJG4 465 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SMIM10L2AP0DMW4 78 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SMIM10L2BP0DMW5 78 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 PEX2P28328 305 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RNF220Q5VTB9 566 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 DNAAF1Q8NEP3 725 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OR7D4Q8NG98 312 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 OR4K2Q8NGD2 314 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF649Q9BS31 505 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MRPS30Q9NP92 439 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 DIDO1Q9BTC0 2240 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 LRRN3E7EW58 273 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CLEC3AO75596 197 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 TOB1P50616 345 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CD47Q08722 323 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SWT1Q5T5J6 900 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 LPCAT4Q643R3 524 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 MON1AQ86VX9 555 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SLC44A1Q8WWI5 657 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF717Q9BY31 904 aaPredicted RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 LRRN3Q9H3W5 708 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CD93Q9NPY3 652 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A9O60656 530 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RNASEH2AO75792 299 aaKnown RBP8.56□□□□□ -1.04
NIPBL-201ENST00000282516 ARL6IP5O75915 188 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A6P19224 532 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A1P22309 533 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT1A4P22310 534 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 UGT2B10P36537 528 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CTBP2P56545 445 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 NFKB2Q00653 900 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 CD83Q01151 205 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 KLF10Q13118 480 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 RPA4Q13156 261 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 WDSUB1Q8N9V3 476 aa8.56□□□□□ -1.04
NIPBL-201ENST00000282516 SLC38A3Q99624 504 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms