RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 NCKAP1Q9Y2A7 1128 aa20.41■□□□□ 0.86
YBX3-202ENST00000279550 KCNE1BA0A087WTH5 132 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 IGLON5A6NGN9 336 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 QSOX1O00391 747 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 ANGPT2O15123 496 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 PRAMEF4O60810 478 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 BCAS2O75934 225 aaPredicted RBP20.4■□□□□ 0.86
YBX3-202ENST00000279550 WDR47O94967 919 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 GSTM1P09488 218 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 HIST1H2AGP0C0S8 130 aaPredicted RBP20.4■□□□□ 0.86
YBX3-202ENST00000279550 HIST1H2ADP20671 130 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 YBX1P67809 324 aaKnown RBP20.4■□□□□ 0.86
YBX3-202ENST00000279550 GSTM4Q03013 218 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 EMX2Q04743 252 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 DPTQ07507 201 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 SFSWAPQ12872 951 aaKnown RBP20.4■□□□□ 0.86
YBX3-202ENST00000279550 GRIK2Q13002 908 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 RCAN2Q14206 197 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 AP5B1Q2VPB7 878 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 PRAMEF9Q5VWM5 478 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 GJD3Q8N144 294 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 CHCHD4Q8N4Q1 142 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 HMGB4Q8WW32 186 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 GLMNQ92990 594 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 ROPN1LQ96C74 230 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 HIST1H2AHQ96KK5 128 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 HIST1H2AJQ99878 128 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 H2AFJQ9BTM1 129 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 SLC29A3Q9BZD2 475 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 ACTL8Q9H568 366 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 TBC1D17Q9HA65 648 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 ZNHIT2Q9UHR6 403 aa20.4■□□□□ 0.86
YBX3-202ENST00000279550 POLR3HQ9Y535 204 aaPredicted RBP20.4■□□□□ 0.86
YBX3-202ENST00000279550 PRORSD1PA6NEY8 169 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 LILRB5O75023 590 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 PSIP1O75475 530 aaKnown RBP20.39■□□□□ 0.86
YBX3-202ENST00000279550 SLC22A3O75751 556 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 ITPKAP23677 461 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 SLC7A2P52569 658 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 HMGCS1Q01581 520 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 CCSMST1Q4G0I0 132 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 RFTN2Q52LD8 501 aaPredicted RBP20.39■□□□□ 0.86
YBX3-202ENST00000279550 RAET1GQ6H3X3 334 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 TTC23LQ6PF05 361 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 XKR5Q6UX68 686 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 RNF165Q6ZSG1 346 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 PCYOX1LQ8NBM8 494 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 BHLHE22Q8NFJ8 381 aaPredicted RBP20.39■□□□□ 0.86
YBX3-202ENST00000279550 MCOLN3Q8TDD5 553 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 NUDT8Q8WV74 236 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 FBXL8Q96CD0 374 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 ATG10Q9H0Y0 220 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 OR2AG1Q9H205 316 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 SPAG4Q9NPE6 437 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 CD320Q9NPF0 282 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 CD93Q9NPY3 652 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 C2orf42Q9NWW7 574 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 ZIM2Q9NZV7 527 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 GULP1Q9UBP9 304 aa20.39■□□□□ 0.86
YBX3-202ENST00000279550 ZFR2Q9UPR6 939 aaKnown RBP20.39■□□□□ 0.86
YBX3-202ENST00000279550 CLDN9O95484 217 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 PDHA2P29803 388 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 GPR1P46091 355 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 BDKRB1P46663 353 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 TPMTP51580 245 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 POLR2JP52435 117 aaKnown RBP20.39■□□□□ 0.85
YBX3-202ENST00000279550 RPS21P63220 83 aaKnown RBP20.39■□□□□ 0.85
YBX3-202ENST00000279550 CAPRIN1Q14444 709 aaKnown RBP20.39■□□□□ 0.85
YBX3-202ENST00000279550 IL23RQ5VWK5 629 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 DHDDSQ86SQ9 333 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 PROKR1Q8TCW9 393 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 DNAJC9Q8WXX5 260 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 USP7Q93009 1102 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 PCDHAC1Q9H158 963 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 ACTR8Q9H981 624 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 SUCOQ9UBS9 1254 aaKnown RBP20.39■□□□□ 0.85
YBX3-202ENST00000279550 CIDEBQ9UHD4 219 aa20.39■□□□□ 0.85
YBX3-202ENST00000279550 ZNF490Q9ULM2 529 aaPredicted RBP20.39■□□□□ 0.85
YBX3-202ENST00000279550 ZFC3H1O60293 1989 aaKnown RBP20.38■□□□□ 0.85
YBX3-202ENST00000279550 PRR23AA6NEV1 266 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 ANKRD28O15084 1053 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 G6PDP11413 515 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 SLC2A4P14672 509 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 HNMTP50135 292 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 AP1S2P56377 157 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 KCNK10P57789 538 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 MRPS22P82650 360 aaKnown RBP20.38■□□□□ 0.85
YBX3-202ENST00000279550 AGERQ15109 404 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 MUM1Q2TAK8 710 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 BCL7AQ4VC05 210 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 PAGE3Q5JUK9 113 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 KIAA1161Q6NSJ0 714 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 CYP20A1Q6UW02 462 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 TRIM46Q7Z4K8 759 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 FAM124AQ86V42 546 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 PLA2G15Q8NCC3 412 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 PJA1Q8NG27 643 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 TMEM159Q96B96 161 aa20.38■□□□□ 0.85
YBX3-202ENST00000279550 MTFMTQ96DP5 389 aaKnown RBP20.38■□□□□ 0.85
YBX3-202ENST00000279550 ANKRD27Q96NW4 1050 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms