RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 COX18Q8N8Q8 333 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TTLQ8NG68 377 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 OR2T29Q8NH02 315 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 KREMEN1Q96MU8 473 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM209Q96SK2 561 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PHB2Q99623 299 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 FAM83DQ9H4H8 585 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MOCS1Q9NZB8 636 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TBC1D14Q9P2M4 693 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 RIMKLBQ9ULI2 386 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MRPS23Q9Y3D9 190 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MAGED1Q9Y5V3 778 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PRNPP04156 253 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PPM1AP35813 382 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 S100A10P60903 97 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HSPB3Q12988 150 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ZNF181Q2M3W8 571 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ASTE1Q2TB18 679 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 BTBD16Q32M84 506 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 UBQLNLQ8IYU4 475 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 NKD1Q969G9 470 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 FAXDC2Q96IV6 333 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HSPA12BQ96MM6 686 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 OR2B2Q9GZK3 357 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SPATA7Q9P0W8 599 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 RNF6Q9Y252 685 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 EXOSC1Q9Y3B2 195 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 E9PAM4 449 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TBX10O75333 385 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SMIM10L2AP0DMW4 78 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SMIM10L2BP0DMW5 78 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 EDNRAP25101 427 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MTPNP58546 118 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MAD2L1BPQ15013 274 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TAF1AQ15573 450 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TSTQ16762 297 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 AADACL4Q5VUY2 407 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 C9orf57Q5W0N0 161 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MSANTD2Q6P1R3 559 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SMARCD3Q6STE5 483 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ASB12Q8WXK4 309 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TMBIM1Q969X1 311 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PCDHB16Q9NRJ7 776 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TMEM39AQ9NV64 488 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 CNTN3Q9P232 1028 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 EIF2B4Q9UI10 523 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HCN2Q9UL51 889 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 IL7RP16871 459 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 S100PP25815 95 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 AIMP2Q13155 320 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HSDL1Q3SXM5 330 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ATAT1Q5SQI0 421 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 NBPF12Q5TAG4 269 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PRPF38BQ5VTL8 546 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ANKRD22Q5VYY1 191 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC7A6OSQ96CW6 309 aaPredicted RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 UCK2Q9BZX2 261 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 CLCA1A8K7I4 914 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 LRRN3E7EW58 273 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 GOT2P00505 430 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 VIPP01282 170 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 IL12BP29460 328 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 GLP1RP43220 463 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 HERVK_113P63132 956 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 MBOAT1Q6ZNC8 495 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ATAD1Q8NBU5 361 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 P2RX7Q99572 595 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 ERVK-6Q9BXR3 956 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 BTBD1Q9H0C5 482 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 LRRN3Q9H3W5 708 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 OXSMQ9NWU1 459 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 FBXL21Q9UKT6 434 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 WASF3Q9UPY6 502 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 PLEKHA6Q9Y2H5 1048 aa8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
SCUBE3-201ENST00000274938 SH3D21A4FU49 640 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 B8ZZF3 427 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 TACR2P21452 398 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 MASP1P48740 699 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 CLCN7P51798 805 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 JAM2P57087 298 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 GBE1Q04446 702 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 EN1Q05925 392 aaPredicted RBP8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 PTGR1Q14914 329 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 SYT16Q17RD7 645 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 CES5AQ6NT32 575 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 PDSS2Q86YH6 399 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 RBM18Q96H35 190 aaKnown RBP8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 WDR18Q9BV38 432 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 ATG10Q9H0Y0 220 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 MYNNQ9NPC7 610 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 GDAP2Q9NXN4 497 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 RABL2AQ9UBK7 228 aaPredicted RBP8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 OAZ3Q9UMX2 235 aa8.53□□□□□ -1.04
SCUBE3-201ENST00000274938 RABL2BQ9UNT1 228 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms