RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR5K2Q8NHB8 316 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 CHRNA10Q9GZZ6 450 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 SYNPO2LQ9H987 977 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 CUEDC1Q9NWM3 386 aaPredicted RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 CIDEBQ9UHD4 219 aa8.62□□□□□ -1.03
TPM3-201ENST00000271850 PACSIN2Q9UNF0 486 aaPredicted RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 PTRH2Q9Y3E5 179 aaKnown RBP8.62□□□□□ -1.03
TPM3-201ENST00000271850 CREBBPQ92793 2442 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 AKAP9Q99996 3911 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 A0A0J9YY10 115 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 IQCF5A8MTL0 148 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 CFAP99D6REC4 459 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 IFRD1O00458 451 aaPredicted RBP8.61□□□□□ -1.03
TPM3-201ENST00000271850 E2F3O00716 465 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SOCS6O14544 535 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 ZSCAN9O15535 394 aaPredicted RBP8.61□□□□□ -1.03
TPM3-201ENST00000271850 OR2B3O76000 313 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 AP2A2O94973 939 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 AP2A1O95782 977 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 RALBP11234 206 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 MAGP20916 626 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 MCM3P25205 808 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 PKLRP30613 574 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 CCR7P32248 378 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 DCTP40126 519 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 CACNG1Q06432 222 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SSPNQ14714 243 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 MYBPC3Q14896 1274 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 KCTD19Q17RG1 926 aaPredicted RBP8.61□□□□□ -1.03
TPM3-201ENST00000271850 MLIPQ5VWP3 458 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 FCRL6Q6DN72 434 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 IGFL3Q6UXB1 125 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 PACS1Q6VY07 963 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 Q6ZS92 163 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 TAS2R42Q7RTR8 314 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 PRUNE1Q86TP1 453 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 TAB3Q8N5C8 712 aaPredicted RBP8.61□□□□□ -1.03
TPM3-201ENST00000271850 OR2Y1Q8NGV0 311 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SLC35B2Q8TB61 432 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 STYXQ8WUJ0 223 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 HEXDCQ8WVB3 486 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 IL17FQ96PD4 163 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 DPH2Q9BQC3 489 aaPredicted RBP8.61□□□□□ -1.03
TPM3-201ENST00000271850 TMEM121Q9BTD3 319 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 DHRS4Q9BTZ2 278 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 TSPY26PQ9H489 355 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SLAMF7Q9NQ25 335 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 P4HTMQ9NXG6 502 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SMARCAL1Q9NZC9 954 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 SERTAD3Q9UJW9 196 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 ASF1AQ9Y294 204 aa8.61□□□□□ -1.03
TPM3-201ENST00000271850 CNTRLQ7Z7A1 2325 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 BTNL10A8MVZ5 291 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 C9J4A7 227 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 LIN7AO14910 233 aaPredicted RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 PRICKLE3O43900 615 aaPredicted RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 GPC4O75487 556 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 ONECUT2O95948 504 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 GOT2P00505 430 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 TPM1P09493 284 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 SHMT2P34897 504 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 NSG1P42857 185 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 RRADP55042 308 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 RWDD2BP57060 319 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 SOX8P57073 446 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 SNRPNP63162 240 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 YBX1P67809 324 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 DCDP81605 110 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 ACVR1Q04771 509 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 Q0VFX4 171 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 PRPSAP1Q14558 356 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 ITIH4Q14624 930 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 SLC5A12Q1EHB4 618 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 PARP6Q2NL67 630 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 CCSMST1Q4G0I0 132 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 NKAIN1Q4KMZ8 207 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 CCDC181Q5TID7 509 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 RAB43Q86YS6 212 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 TMEM139Q8IV31 216 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 CCDC170Q8IYT3 715 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 TBC1D21Q8IYX1 336 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 C2orf73Q8N5S3 287 aaPredicted RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 OR52K1Q8NGK4 314 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 PROKR1Q8TCW9 393 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 ELMO1Q92556 727 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 SGSM3Q96HU1 749 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 ZNF285Q96NJ3 590 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 LRRC40Q9H9A6 602 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 SLC6A20Q9NP91 592 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 ENAMQ9NRM1 1142 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 OR6C2Q9NZP2 312 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 C5AR2Q9P296 337 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 IMPACTQ9P2X3 320 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 FEZ2Q9UHY8 353 aaPredicted RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 B3GNT3Q9Y2A9 372 aa8.6□□□□□ -1.03
TPM3-201ENST00000271850 TDRKHQ9Y2W6 561 aaKnown RBP8.6□□□□□ -1.03
TPM3-201ENST00000271850 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms