RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 ERVK-8P63133 956 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 ATXN7L2Q5T6C5 722 aaPredicted RBP10.96□□□□□ -0.65
CHFR-201ENST00000266880 PAMR1Q6UXH9 720 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 RAVER1Q8IY67 606 aaKnown RBP10.96□□□□□ -0.65
CHFR-201ENST00000266880 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 SNIP1Q8TAD8 396 aaKnown RBP10.96□□□□□ -0.65
CHFR-201ENST00000266880 CTPS2Q9NRF8 586 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 ASF1BQ9NVP2 202 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 TMEM45AQ9NWC5 275 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 NFASCO94856 1347 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 SPATA31E1Q6ZUB1 1445 aa10.96□□□□□ -0.65
CHFR-201ENST00000266880 EEF1E1O43324 174 aaKnown RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 SLC25A14O95258 325 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 PTGR1Q14914 329 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 MAD2L1BPQ15013 274 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 IFI44LQ53G44 452 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 ZBTB45Q96K62 511 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 RANBP3Q9H6Z4 567 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 CD320Q9NPF0 282 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 IMP3Q9NV31 184 aaKnown RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 BORCS7-ASMTA0A0B4J1R7 106 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 ATP6V1G2-DDX39BF2Z307 99 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 EVI2BP34910 448 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 KIAA1324Q6UXG2 1013 aaKnown RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 DTX3Q8N9I9 347 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 GLT1D1Q96MS3 346 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 KCNS2Q9ULS6 477 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 A0A0A6YYH2 397 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 A6NJ64 397 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 RGL2O15211 777 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 INMTO95050 263 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 PET100P0DJ07 73 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 NUDT6P53370 316 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 RBM23Q86U06 439 aaKnown RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 CSGALNACT1Q8TDX6 532 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TCTEX1D2Q8WW35 142 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TIGARQ9NQ88 270 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 FBXW2Q9UKT8 454 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 UGGT1Q9NYU2 1555 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TRAV19A0A0A6YYK7 116 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TXNL1O43396 289 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TGM6O95932 706 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 CYP11A1P05108 521 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 ITGA5P08648 1049 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 HSD11B1P28845 292 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 KANK2Q63ZY3 851 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 OTOP3Q7RTS5 596 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 ARHGAP12Q8IWW6 846 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 RTFDC1Q9BY42 306 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 PAQR5Q9NXK6 330 aaPredicted RBP10.96□□□□□ -0.66
CHFR-201ENST00000266880 SH3BGRL2Q9UJC5 107 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 ABCA8O94911 1581 aa10.96□□□□□ -0.66
CHFR-201ENST00000266880 TBC1D3BA6NDS4 549 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 OR6C6A6NF89 314 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 KCNJ13O60928 360 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 IL7RP16871 459 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 CDK10Q15131 360 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 TMEM119Q4V9L6 283 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 CPT1CQ8TCG5 803 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 GADD45GO95257 159 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 SLC25A27O95847 323 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 LCKP06239 509 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 LAPTM5Q13571 262 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 SF1Q15637 639 aaKnown RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 TNFAIP8L2Q6P589 184 aaPredicted RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 OR10G2Q8NGC3 310 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 SACM1LQ9NTJ5 587 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 CCL15-CCL14A0A0B4J2E2 113 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 ETV1P50549 477 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 CCL15Q16663 113 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 EPS8L1Q8TE68 723 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 TRAPPC12Q8WVT3 735 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 DNAJB3Q8WWF6 145 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 MYOCQ99972 504 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 CPA4Q9UI42 421 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 TNS3Q68CZ2 1445 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 FRMPD4Q14CM0 1322 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 F5H0A9 414 aaPredicted RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 AGO1Q9UL18 857 aaKnown RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 LRRC10BA6NIK2 292 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 PENKP01210 267 aaPredicted RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 GRIA1P42261 906 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 PRR5P85299 388 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 GCNT1Q02742 428 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 PON3Q15166 354 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 EIPR1Q53HC9 387 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 GPR158Q5T848 1215 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 PRPF38BQ5VTL8 546 aaKnown RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 TICAM1Q8IUC6 712 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 ZBTB2Q8N680 514 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 ZNF611Q8N823 705 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 HBEGFQ99075 208 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 ZNF223Q9UK11 482 aaPredicted RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 PPM1HQ9ULR3 514 aa10.95□□□□□ -0.66
CHFR-201ENST00000266880 RUVBL1Q9Y265 456 aaKnown RBP10.95□□□□□ -0.66
CHFR-201ENST00000266880 SLC27A6Q9Y2P4 619 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms