RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SLC32A1Q9H598 525 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 BRD9Q9H8M2 597 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 HCFC1R1Q9NWW0 138 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 LIMD1Q9UGP4 676 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 SLCO3A1Q9UIG8 710 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 TMPRSS11EQ9UL52 423 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 MAFFQ9ULX9 164 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 HS3ST2Q9Y278 367 aa12.58□□□□□ -0.39
CPSF6-201ENST00000266679 GRM6O15303 877 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 FGF18O76093 207 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 IL6P05231 212 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 RAP2AP10114 183 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 AOAHP28039 575 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 ABRAXAS1Q6UWZ7 409 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 SERPINA13PQ6UXR4 307 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 TMEM25Q86YD3 366 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 GALNT13Q8IUC8 556 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 PHACTR4Q8IZ21 702 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 GLB1L3Q8NCI6 653 aaPredicted RBP12.58□□□□□ -0.4
CPSF6-201ENST00000266679 FAM162AQ96A26 154 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 PYCR2Q96C36 320 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 CCDC115Q96NT0 180 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 OR52E6Q96RD3 313 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 NTN4Q9HB63 628 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 CD320Q9NPF0 282 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 ASAH2Q9NR71 780 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 ASIC5Q9NY37 505 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 ZNF639Q9UID6 485 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 DLGAP4Q9Y2H0 992 aa12.58□□□□□ -0.4
CPSF6-201ENST00000266679 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 UPK1AO00322 258 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 DEAF1O75398 565 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ASLP04424 464 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 CCR2P41597 374 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 MTHFRP42898 656 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 SPINT3P49223 89 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 NEK2P51955 445 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 RPS14P62263 151 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 CREMQ03060 361 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 NKG7Q16617 165 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ZXDCQ2QGD7 858 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 METTL2BQ6P1Q9 378 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 LRRC70Q7Z2Q7 622 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 NCLNQ969V3 563 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 HIC2Q96JB3 615 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 RAD9AQ99638 391 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ELOVL6Q9H5J4 265 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 LIN28AQ9H9Z2 209 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 SLC6A13Q9NSD5 602 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 FAM8A1Q9UBU6 413 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ADGRE2Q9UHX3 823 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 PPIL1Q9Y3C6 166 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 MAGED1Q9Y5V3 778 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 AREL1O15033 823 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 POP4O95707 220 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 B3GALT4O96024 378 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ALBP02768 609 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 C8GP07360 202 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 CTSAP10619 480 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 ITPKAP23677 461 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 PPM1AP35813 382 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 CDK9P50750 372 aaKnown RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 PLCL1Q15111 1095 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 GCNT7Q6ZNI0 430 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 KREMEN2Q8NCW0 462 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 TCEAL4Q96EI5 215 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 SLC47A1Q96FL8 570 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 TSSK3Q96PN8 268 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 PARVBQ9HBI1 364 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 TUBA8Q9NY65 449 aaPredicted RBP12.57□□□□□ -0.4
CPSF6-201ENST00000266679 UTS2RQ9UKP6 389 aa12.57□□□□□ -0.4
CPSF6-201ENST00000266679 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 KCNE1BA0A087WTH5 132 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ELOVL7A1L3X0 281 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CXCR6O00574 342 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 TRMUO75648 421 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 GSNP06396 782 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 HIST1H2AGP0C0S8 130 aaPredicted RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PABPC1P11940 636 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 TCF3P15923 654 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 HIST1H2ADP20671 130 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 YAP1P46937 504 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ARSFP54793 590 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ADARB1P78563 741 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 LAPTM5Q13571 262 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 DAG1Q14118 895 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 C11orf91Q3C1V1 193 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PTCHD3Q3KNS1 767 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 RUNDC3AQ59EK9 446 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CCDC149Q6ZUS6 474 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
CPSF6-201ENST00000266679 STK32CQ86UX6 486 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 ANKRD46Q86W74 232 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 MICU2Q8IYU8 434 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 CLEC4FQ8N1N0 589 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 AADATQ8N5Z0 425 aa12.56□□□□□ -0.4
CPSF6-201ENST00000266679 AURKBQ96GD4 344 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms