RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 KLHDC8AQ8IYD2 350 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PGAM4Q8N0Y7 254 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 MTFMTQ96DP5 389 aaKnown RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SLC45A3Q96JT2 553 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 BRINP2Q9C0B6 783 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 ELOVL6Q9H5J4 265 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 WDR41Q9HAD4 459 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SLC2A4RGQ9NR83 387 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 SNX6Q9UNH7 406 aa11.24□□□□□ -0.61
SCAF11-201ENST00000266589 DNMT3AQ9Y6K1 912 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-201ENST00000266589 E7EQ34 232 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 MRASO14807 208 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 NRP2O60462 931 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 PDYNP01213 254 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 ACSL1P33121 698 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 RGS19P49795 217 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TPMTP51580 245 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 RPL38P63173 70 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 IRF8Q02556 426 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 EMX2Q04743 252 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TDGQ13569 410 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 RFTN2Q52LD8 501 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 PDCD4Q53EL6 469 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 C6orf163Q5TEZ5 329 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 C1orf146Q5VVC0 180 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 PGM2L1Q6PCE3 622 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 UNC5DQ6UXZ4 953 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 BNC2Q6ZN30 1099 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 RIPOR1Q6ZS17 1223 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 CHST15Q7LFX5 561 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 SYTL1Q8IYJ3 562 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 ZNF480Q8WV37 535 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 SELENOMQ8WWX9 145 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 HLA-CQ95604 372 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 CCDC124Q96CT7 223 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 OR4K3Q96R72 315 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 PRPF19Q9UMS4 504 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 PSMD13Q9UNM6 376 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 ASF1AQ9Y294 204 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 POLR3HQ9Y535 204 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 BBIP1A8MTZ0 92 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 CLGNO14967 610 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 CFLARO15519 480 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 UGDHO60701 494 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 SORBS2O94875 1100 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 FUCA1P04066 466 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 ACP5P13686 325 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 SLC2A4P14672 509 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 JUPP14923 745 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 CAPN3P20807 821 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 UFM1P61960 85 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TBPL1P62380 186 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 GRIK2Q13002 908 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 LRP8Q14114 963 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TRMT5Q32P41 509 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 XKR6Q5GH73 641 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TMEM31Q5JXX7 168 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 METRNLQ641Q3 311 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 Q6ZS52 159 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 RGL4Q8IZJ4 473 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 FBXW8Q8N3Y1 598 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 MAGEC3Q8TD91 643 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 HMGB4Q8WW32 186 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 TEX37Q96LM6 180 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 MAGEB10Q96LZ2 347 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 APOOQ9BUR5 198 aa11.23□□□□□ -0.61
SCAF11-201ENST00000266589 NOP53Q9NZM5 478 aaKnown RBP11.23□□□□□ -0.61
SCAF11-201ENST00000266589 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 SLC22A3O75751 556 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 CEACAM5P06731 702 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 RPL10P27635 214 aaKnown RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 DPP6P42658 865 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 GNPDA1P46926 289 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 NEK2P51955 445 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 MTTPP55157 894 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 TSTA3Q13630 321 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 MLF2Q15773 248 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 VPS26BQ4G0F5 336 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 IL23RQ5VWK5 629 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 LIPJQ5W064 366 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 CAPN13Q6MZZ7 669 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 HPS6Q86YV9 775 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 PHC3Q8NDX5 983 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 OR5AR1Q8NGP9 310 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 ASB12Q8WXK4 309 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 TFGQ92734 400 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 CDRT15Q96T59 188 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 UHRF1Q96T88 793 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 SERPINI1Q99574 410 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 CDX2Q99626 313 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-201ENST00000266589 ACPTQ9BZG2 426 aa11.22□□□□□ -0.61
SCAF11-201ENST00000266589 BTBD1Q9H0C5 482 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms