RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ZNF839A8K0R7 811 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ARHGEF33A8MVX0 844 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 C2CD4DB7Z1M9 353 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 SAP18O00422 153 aaKnown RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 GAPDHSO14556 408 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 ITGAXP20702 1163 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 IL10P22301 178 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 PRDX6P30041 224 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 AKT2P31751 481 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 MEF2AQ02078 507 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 ARMC6Q6NXE6 501 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ZNF621Q6ZSS3 439 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 NET1Q7Z628 596 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 HORMAD1Q86X24 394 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 OR9A1PQ8NGU1 263 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 N4BP2L2Q92802 583 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 DPEP2Q9H4A9 486 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ITM2CQ9NQX7 267 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 FARSBQ9NSD9 589 aaKnown RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 PCDHGA11Q9Y5H2 935 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ANAPC1Q9H1A4 1944 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 MANBAO00462 879 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 SOAT1P35610 550 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 PRLHRP49683 370 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 DGKQP52824 942 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ILF3Q12906 894 aaKnown RBP eCLIP9.07□□□□□ -0.96
SSR3-201ENST00000265044 FBXO43Q4G163 708 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 MED27Q6P2C8 311 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 CYP20A1Q6UW02 462 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 TECPR1Q7Z6L1 1165 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 PGAM4Q8N0Y7 254 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 WDR60Q8WVS4 1066 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 KCTD14Q9BQ13 255 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 UBE2ZQ9H832 354 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 TRPV4Q9HBA0 871 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 TAC3Q9UHF0 121 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 PTBP2Q9UKA9 531 aaKnown RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 CA5BQ9Y2D0 317 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 RNF103-CHMP3A0A140T963 221 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 EIF3FO00303 357 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 AREL1O15033 823 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 MGRN1O60291 552 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 TGFB1P01137 390 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 NTRK1P04629 796 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 TPD52P55327 224 aaPredicted RBP9.07□□□□□ -0.96
SSR3-201ENST00000265044 TIAL1Q01085 375 aaKnown RBP eCLIP9.07□□□□□ -0.961e-7■■■□□ 16.2
SSR3-201ENST00000265044 SLBPQ14493 270 aaKnown RBP eCLIP9.07□□□□□ -0.96
SSR3-201ENST00000265044 FAM174BQ3ZCQ3 159 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 KANK2Q63ZY3 851 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ASRGL1Q7L266 308 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 GPR180Q86V85 440 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 ANKRD46Q86W74 232 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 SLC44A3Q8N4M1 653 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 PDPRQ8NCN5 879 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 RLN3Q8WXF3 142 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 DLG3Q92796 817 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 HLA-CQ95604 372 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 HDAC8Q9BY41 377 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 AHSPQ9NZD4 102 aa9.07□□□□□ -0.96
SSR3-201ENST00000265044 CAPN14A8MX76 684 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 FKBP6O75344 327 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GSNP06396 782 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 EFNA1P20827 205 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 CCR3P51677 355 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 PTGR1Q14914 329 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 IRF4Q15306 451 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 CTC1Q2NKJ3 1217 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 ZNF542PQ5EBM4 170 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 ZNF852Q6ZMS4 543 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 ATG14Q6ZNE5 492 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 DHFR2Q86XF0 187 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GALNT4Q8N4A0 578 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 ZNF483Q8TF39 744 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 JADE3Q92613 823 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 UBE2E3Q969T4 207 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 EME1Q96AY2 570 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GPR174Q9BXC1 333 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 XKR8Q9H6D3 395 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 SERGEFQ9UGK8 458 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 MBD1Q9UIS9 605 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 PRPF19Q9UMS4 504 aaKnown RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 SNX13Q9Y5W8 968 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 MTCH2Q9Y6C9 303 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 NUP214P35658 2090 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 A0A1B0GTL3 188 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GSAPA4D1B5 854 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 KCNH1O95259 989 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GSTM1P09488 218 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 ALOX15P16050 662 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 CD9P21926 228 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 FCARP24071 287 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 CXCR2P25025 360 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 IL1RL1Q01638 556 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 GSTM4Q03013 218 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 CDKN3Q16667 212 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 HSF5Q4G112 596 aaPredicted RBP9.06□□□□□ -0.96
SSR3-201ENST00000265044 PRAMEF14Q5SWL7 426 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 PRAMEF13Q5VWM6 474 aa9.06□□□□□ -0.96
SSR3-201ENST00000265044 TAF8Q7Z7C8 310 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms