RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NIPSNAP2O75323 286 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 C1orf105O95561 183 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 S1PR4O95977 384 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 PTCHD3Q3KNS1 767 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 PTRH1Q86Y79 214 aaKnown RBP15.49■□□□□ 0.07
USE1-201ENST00000263897 APLFQ8IW19 511 aaPredicted RBP15.49■□□□□ 0.07
USE1-201ENST00000263897 FAM20CQ8IXL6 584 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 SYTL1Q8IYJ3 562 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 ENDOVQ8N8Q3 282 aaKnown RBP15.49■□□□□ 0.07
USE1-201ENST00000263897 NAT8LQ8N9F0 302 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 SKA2Q8WVK7 121 aaPredicted RBP15.49■□□□□ 0.07
USE1-201ENST00000263897 THAP4Q8WY91 577 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 SIGLEC10Q96LC7 697 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 PLCL2Q9UPR0 1127 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 MAN2B2Q9Y2E5 1009 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 PCM1Q15154 2024 aa15.49■□□□□ 0.07
USE1-201ENST00000263897 GOLGA6L10A0A0M3HER8 536 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 ZCWPW2A0A1B0GU75 182 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 MKRN2OSH3BPM6 223 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 PRICKLE3O43900 615 aaPredicted RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 MATN4O95460 622 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 PKMP14618 531 aaKnown RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 CHRM3P20309 590 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 MAGP20916 626 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 AGXTP21549 392 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 MAGEA3P43357 314 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 PMS2P54278 862 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 GBX1Q14549 363 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 DEFB110Q30KQ9 67 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 ZNF385CQ66K41 422 aaPredicted RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 PPIL6Q8IXY8 311 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 ZNF669Q96BR6 464 aaPredicted RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 FOPNLQ96NB1 174 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 RAB11FIP5Q9BXF6 653 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 INTS10Q9NVR2 710 aaKnown RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 IL1RAPL1Q9NZN1 696 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 GALPQ9UBC7 116 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 TLK1Q9UKI8 766 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 TCFL5Q9UL49 500 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 RUVBL2Q9Y230 463 aaKnown RBP15.48■□□□□ 0.07
USE1-201ENST00000263897 VPS9D1Q9Y2B5 631 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 KLHL20Q9Y2M5 609 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 TENM4Q6N022 2769 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 CCDC88CQ9P219 2028 aa15.48■□□□□ 0.07
USE1-201ENST00000263897 MYO18BQ8IUG5 2567 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FER1L5A0AVI2 2057 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 NBASA2RRP1 2371 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FLNBO75369 2602 aaKnown RBP15.47■□□□□ 0.07
USE1-201ENST00000263897 RFPL1O75677 317 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FKBP9O95302 570 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 CTSBP07858 339 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 ATP5DP30049 168 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 CCNFP41002 786 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 CTBP1Q13363 440 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 IL10RAQ13651 578 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 THOC5Q13769 683 aaKnown RBP15.47■□□□□ 0.07
USE1-201ENST00000263897 SF1Q15637 639 aaKnown RBP15.47■□□□□ 0.07
USE1-201ENST00000263897 CCSMST1Q4G0I0 132 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 RHBDD2Q6NTF9 364 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 TCTN3Q6NUS6 607 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 TLDC1Q6P9B6 456 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FIGLAQ6QHK4 219 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FAM198BQ6UWH4 519 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 AGGF1Q8N302 714 aaeCLIP15.47■□□□□ 0.07
USE1-201ENST00000263897 MAGEC3Q8TD91 643 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 ADAMTS17Q8TE56 1095 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 FAM136AQ96C01 138 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 EURLQ9NYK6 297 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 SNX7Q9UNH6 387 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 MAD1L1Q9Y6D9 718 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 ANKRD12Q6UB98 2062 aa15.47■□□□□ 0.07
USE1-201ENST00000263897 CTAGE9A4FU28 777 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 PYCARD-AS1I3L0S3 204 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 USP1O94782 785 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 CBSLP0DN79 551 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 TCP1P17987 556 aaKnown RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 CBSP35520 551 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 BDKRB1P46663 353 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 PPP1R7Q15435 360 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 LACTB2Q53H82 288 aaPredicted RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 RNASEH2BQ5TBB1 312 aaKnown RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 FCRL6Q6DN72 434 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 ZNF470Q6ECI4 717 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 CNSTQ6PJW8 725 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 TAX1BP1Q86VP1 789 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 MCATQ8IVS2 390 aaKnown RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 DENND6AQ8IWF6 608 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 LMNTD2Q8IXW0 634 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 RAB42Q8N4Z0 105 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 ZBTB2Q8N680 514 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 ZNF655Q8N720 491 aaPredicted RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 HMGCLL1Q8TB92 370 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 ZUFSPQ96AP4 578 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 INTS7Q9NVH2 962 aaKnown RBP15.46■□□□□ 0.07
USE1-201ENST00000263897 ANAPC2Q9UJX6 822 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 TP53TG5Q9Y2B4 290 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 FAM169AQ9Y6X4 670 aa15.46■□□□□ 0.07
USE1-201ENST00000263897 TARM1B6A8C7 271 aa15.45■□□□□ 0.06
USE1-201ENST00000263897 C9J4A7 227 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms