RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 XKP51811 444 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 IPPKQ9H8X2 491 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 FBXO5Q9UKT4 447 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 MEN1O00255 615 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 FASTKD3Q14CZ7 662 aaKnown RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 PARP15Q460N3 678 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OTOP1Q7RTM1 612 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 TRAPPC6BQ86SZ2 158 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 DUSP16Q9BY84 665 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 LRRC7Q96NW7 1537 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 ABCA8O94911 1581 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 FMO3P31513 532 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 FOXK1P85037 733 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 ZER1Q7Z7L7 766 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 PDLIM2Q96JY6 352 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 GPR21Q99679 349 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 A0A0G2JMP0 313 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 MPPED1O15442 326 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 MRPS5P82675 430 aaKnown RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CD83Q01151 205 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CBLBQ13191 982 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OTOP3Q7RTS5 596 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OXR1Q8N573 874 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 POGLUT1Q8NBL1 392 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 GSTCDQ8NEC7 633 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OR4M2Q8NGB6 313 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 MAGEE1Q9HCI5 957 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 TAS2R14Q9NYV8 317 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 BTN2A3PQ96KV6 586 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 MIPEPQ99797 713 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 SSX3Q99909 188 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 PEX16Q9Y5Y5 336 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 YDJCA8MPS7 323 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 IFNGR1P15260 489 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CCR8P51685 355 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 RFWD3Q6PCD5 774 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 COPS5Q92905 334 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 EFCAB9A8MZ26 197 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 BCAS1O75363 584 aaPredicted RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 HRGP04196 525 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 ACTR1AP61163 376 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 DEFB119Q8N690 84 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 ZFP37Q9Y6Q3 630 aaPredicted RBP11.17□□□□□ -0.62
PTPN4-201ENST00000263708 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 BORCS7-ASMTA0A0B4J1R7 106 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CLDN11O75508 207 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 TM7SF2O76062 418 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CHMP24386 653 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 CCNCP24863 283 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 DPY19L4Q7Z388 723 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 TSTD1Q8NFU3 115 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 OR10A6Q8NH74 314 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 BORCS7Q96B45 105 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 FRMPD4Q14CM0 1322 aa11.17□□□□□ -0.62
PTPN4-201ENST00000263708 C9JVG2 144 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 MATKP42679 507 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 TAF10Q12962 218 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 VGLL4Q14135 290 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 PHTF2Q8N3S3 785 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 PRR36Q9H6K5 1346 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 E9PAM4 449 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 TNFSF9P41273 254 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 NFKB2Q00653 900 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 ZACNQ401N2 412 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 ARHGAP40Q5TG30 622 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 KCNC2Q96PR1 638 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 HBEGFQ99075 208 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 MTFR1LQ9H019 292 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SYNGR4O95473 234 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 STATHP02808 62 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 CRISP1P54107 249 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 TCEANCQ8N8B7 351 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 MFSD8Q8NHS3 518 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SPATA22Q8NHS9 363 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 NUDT4Q9NZJ9 180 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 KCNU1A8MYU2 1149 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 LATS1O95835 1130 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 THEGLP0DJG4 465 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
PTPN4-201ENST00000263708 TIE1P35590 1138 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SSTP61278 116 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 ECT2LQ008S8 904 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 MRPL49Q13405 166 aaKnown RBP11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SH3BGRL2Q9UJC5 107 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 TOR1BO14657 336 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SFTPBP07988 381 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 OAZ1P54368 228 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 RASGEF1CQ8N431 466 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SIDT2Q8NBJ9 832 aaKnown RBP11.16□□□□□ -0.62
PTPN4-201ENST00000263708 SMPD3Q9NY59 655 aaPredicted RBP11.16□□□□□ -0.62
PTPN4-201ENST00000263708 PCDHB3Q9Y5E6 796 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 hCG_1807616A0A1W2PRN6 198 aa11.16□□□□□ -0.62
PTPN4-201ENST00000263708 KLK3P07288 261 aaPredicted RBP11.16□□□□□ -0.62
PTPN4-201ENST00000263708 CSTF2P33240 577 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms