RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 MAZP56270 477 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 AP1S2P56377 157 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 YBX1P67809 324 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 CDKL1Q00532 357 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 OCRLQ01968 901 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 TCF15Q12870 199 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 RCN2Q14257 317 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 ARL13AQ5H913 290 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 ATG16L1Q676U5 607 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 ANKS6Q68DC2 871 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 TTC23LQ6PF05 361 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 RGS9BPQ6ZS82 235 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 FRMD7Q6ZUT3 714 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 GOLGA7Q7Z5G4 137 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 GKN2Q86XP6 184 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 TRIM42Q8IWZ5 723 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SYTL1Q8IYJ3 562 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 FBXO15Q8NCQ5 510 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 PRSS33Q8NF86 280 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 OR52E1Q8NGJ3 308 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 PPP4R1Q8TF05 950 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SREK1Q8WXA9 508 aaKnown RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 RAD51AP1Q96B01 352 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 CCDC126Q96EE4 140 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 PRR11Q96HE9 360 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 ELF4Q99607 663 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 MENTQ9BUN1 341 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 DRC3Q9H069 523 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 GAREM1Q9H706 876 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 ERVMER34-1Q9H9K5 563 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 PNPOQ9NVS9 261 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SH2B3Q9UQQ2 575 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC22A14Q9Y267 594 aa9.45□□□□□ -0.9
SNRNP40-201ENST00000263694 FRYLO94915 3013 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GMNCA6NCL1 334 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 TMEM233B4DJY2 109 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 E7ENX8 843 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 KLF11O14901 512 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 NPHS1O60500 1241 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 WDR47O94967 919 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 EPN2O95208 641 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 HSPA4LO95757 839 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ANXA6P08133 673 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GIMD1P0DJR0 217 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 XRCC1P18887 633 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 DRD4P21917 467 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GRK2P25098 689 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GGT5P36269 586 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 MPLP40238 635 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 MAPK9P45984 424 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC6A12P48065 614 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 PNLIPRP1P54315 467 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 TAP2Q03519 686 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CLCQ05315 142 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ASPHQ12797 758 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GTF2H2Q13888 395 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 PCBP2Q15366 365 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 RBBP7Q16576 425 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF423Q2M1K9 1284 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CGB2Q6NT52 195 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GTF2H2CQ6P1K8 395 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZC3H14Q6PJT7 736 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 TRIM48Q8IWZ4 208 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 LRRC56Q8IYG6 542 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 SFRP1Q8N474 314 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF781Q8N8C0 355 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 SNX31Q8N9S9 440 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 LINC01555Q8NAE3 123 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 OR4E2Q8NGC2 313 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 OR52B6Q8NGF0 335 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF483Q8TF39 744 aaPredicted RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 UBTD2Q8WUN7 234 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CHMP6Q96FZ7 201 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CNDP1Q96KN2 507 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CDK15Q96Q40 435 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 OR4K3Q96R72 315 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ACAT2Q9BWD1 397 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GTPBP2Q9BX10 602 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 C1QTNF3Q9BXJ4 246 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 MVB12BQ9H7P6 319 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 NOL11Q9H8H0 719 aaKnown RBP9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC40A1Q9NP59 571 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 FAM86C1Q9NVL1 165 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 THAP1Q9NVV9 213 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 CPNE7Q9UBL6 633 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 OPTCQ9UBM4 332 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZDHHC2Q9UIJ5 367 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ZNF225Q9UK10 706 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 GMEB2Q9UKD1 530 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 TMCO1Q9UM00 188 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 SLC6A14Q9UN76 642 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ICKQ9UPZ9 632 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 FIS1Q9Y3D6 152 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 ASXL3Q9C0F0 2248 aa9.44□□□□□ -0.9
SNRNP40-201ENST00000263694 A0A1B0GTQ1 180 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 TMEM114B3SHH9 223 aa9.43□□□□□ -0.9
SNRNP40-201ENST00000263694 K7EPI3 171 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms