RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ATP1B2P14415 290 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 PAICSP22234 425 aaKnown RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 KIR3DL1P43629 444 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 MASP1P48740 699 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 DEFA1P59665 94 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 DEFA3P59666 94 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 MYBPC1Q00872 1141 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 LRP8Q14114 963 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 INAQ16352 499 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 RBM20Q5T481 1227 aaKnown RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 CPNE9Q8IYJ1 553 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 SETD9Q8NE22 299 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 SPPL2AQ8TCT8 520 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 NR4A3Q92570 626 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 OLFM1Q99784 485 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 KCTD14Q9BQ13 255 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 ADAM12O43184 909 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 SEC22BO75396 215 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 HSD17B1P14061 328 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 DHPSP49366 369 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 ARFIP1P53367 373 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 DEFB103AP81534 67 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 ARF5P84085 180 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 FAM220AQ7Z4H9 259 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 DCUN1D3Q8IWE4 304 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 IZUMO1Q8IYV9 350 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 KLHL32Q96NJ5 620 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 NDNQ99608 321 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 C1QTNF1Q9BXJ1 281 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 CD320Q9NPF0 282 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 PIH1D1Q9NWS0 290 aaKnown RBP8.05□□□□□ -1.12
PTPN3-201ENST00000262539 SLC7A8Q9UHI5 535 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 NEU3Q9UQ49 428 aa8.05□□□□□ -1.12
PTPN3-201ENST00000262539 LINC01553A4QN01 128 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 OR6B1O95007 311 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SEMA3DO95025 777 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ACRV1P26436 265 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ARSDP51689 593 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 GPRC6AQ5T6X5 926 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 PGM2L1Q6PCE3 622 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 FAM151BQ6UXP7 276 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 RNFT2Q96EX2 444 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ITCHQ96J02 903 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ZFRQ96KR1 1074 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 AIF1LQ9BQI0 150 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 TRMT61BQ9BVS5 477 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 DENND2DQ9H6A0 471 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 EBF2Q9HAK2 575 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 IGSF5Q9NSI5 407 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 AIG1Q9NVV5 245 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SH3GLB1Q9Y371 365 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 A0A0D9SEW6 157 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 C2orf78A6NCI8 922 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CCDC154A6NI56 674 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 TARM1B6A8C7 271 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 TPST1O60507 370 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 BCAS2O75934 225 aaPredicted RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF23P17027 643 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SMIM11AP58511 58 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 RHDQ02161 417 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CASP12Q6UXS9 341 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 C17orf64Q86WR6 236 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 TTC9BQ8N6N2 239 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ATG16L2Q8NAA4 619 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 PNPT1Q8TCS8 783 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 UTP15Q8TED0 518 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 THAP11Q96EK4 314 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CCDC106Q9BWC9 280 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 HEBP1Q9NRV9 189 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SLC2A6Q9UGQ3 507 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 DUSP12Q9UNI6 340 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 PRLP01236 227 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 GATMP50440 423 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 IL27RAQ6UWB1 636 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 IKBIPQ70UQ0 350 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CACTIN-AS1Q8N1I8 211 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ATP6V1C2Q8NEY4 427 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 OR8J3Q8NGG0 315 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 FAR1Q8WVX9 515 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 DNASE1L2Q92874 299 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CNBD2Q96M20 576 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 LRRC3Q9BY71 257 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 PCDHGA2Q9Y5H1 932 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SNX13Q9Y5W8 968 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 MAN2B1O00754 1011 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 UGT1A9O60656 530 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 C5AR1P21730 350 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ABHD18Q0P651 414 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 SPIN4Q56A73 249 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 DDI2Q5TDH0 399 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CRTC3Q6UUV7 619 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 RBM12BQ8IXT5 1001 aaKnown RBP8.04□□□□□ -1.12
PTPN3-201ENST00000262539 GJD3Q8N144 294 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 ZSCAN1Q8NBB4 408 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 RASSF5Q8WWW0 418 aa8.04□□□□□ -1.12
PTPN3-201ENST00000262539 GPR78Q96P69 363 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms