RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 CD300AQ9UGN4 299 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 FAF1Q9UNN5 650 aaPredicted RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 TMEM98Q9Y2Y6 226 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 PCYT1BQ9Y5K3 369 aaPredicted RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 V9GYQ6 96 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 ZFC3H1O60293 1989 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 PABPN1LA6NDY0 278 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 NUAK1O60285 661 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 MATN4O95460 622 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 B3GALT4O96024 378 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SOD1P00441 154 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 PRNPP04156 253 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 CBSLP0DN79 551 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 MTHFD1P11586 935 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 SLC6A2P23975 617 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 GJA4P35212 333 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 CBSP35520 551 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 STT3AP46977 705 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 NAA20P61599 178 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 GSTM4Q03013 218 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 SYCE2Q6PIF2 218 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SPPL2CQ8IUH8 684 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 TRAPPC5Q8IUR0 188 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 DDHD1Q8NEL9 900 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 TRIM54Q9BYV2 358 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 SLC32A1Q9H598 525 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 CNOT6Q9ULM6 557 aaKnown RBP13.23□□□□□ -0.29
VMP1-201ENST00000262291 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 CCL27Q9Y4X3 112 aa13.23□□□□□ -0.29
VMP1-201ENST00000262291 F5P12259 2224 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 A0A1W2PP18 115 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 SOBPA7XYQ1 873 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 ADRB3P13945 408 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 HOXD12P35452 270 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GRIA3P42263 894 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 HALP42357 657 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 RCAN2Q14206 197 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 ADNP2Q6IQ32 1131 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 PARM1Q6UWI2 310 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 CFAP206Q8IYR0 622 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 LIX1Q8N485 282 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GALNT4Q8N4A0 578 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 PLA2G15Q8NCC3 412 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 FNDC8Q8TC99 324 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 SUSD6Q92537 303 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 KLK6Q92876 244 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GFM2Q969S9 779 aaKnown RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 ASB9Q96DX5 294 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 PRPF18Q99633 342 aaKnown RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 C19orf43Q9BQ61 176 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 RDH14Q9HBH5 336 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 DKK3Q9UBP4 350 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 NUP210Q8TEM1 1887 aaPredicted RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 EDDM13A0A1B0GTR0 161 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 A0A1B0GTW7 788 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 E2F6O75461 281 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 CLDN9O95484 217 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GPR1P46091 355 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 DCDC1P59894 354 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 KCNC3Q14003 757 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 GBX1Q14549 363 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 SAMD4BQ5PRF9 694 aaKnown RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 C2orf73Q8N5S3 287 aaPredicted RBP13.22□□□□□ -0.29
VMP1-201ENST00000262291 ASZ1Q8WWH4 475 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 SELENOMQ8WWX9 145 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 FGF14Q92915 247 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 CNBD2Q96M20 576 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 ACPTQ9BZG2 426 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 BRINP2Q9C0B6 783 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 SMOXQ9NWM0 555 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 NUMA1Q14980 2115 aa13.22□□□□□ -0.29
VMP1-201ENST00000262291 PLXNA2O75051 1894 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 TPST1O60507 370 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 TRMUO75648 421 aaKnown RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 LRATO95237 230 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 FTH1P02794 183 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 C8GP07360 202 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 GDI1P31150 447 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 PHEXP78562 749 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
VMP1-201ENST00000262291 CNTN1Q12860 1018 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 NAE1Q13564 534 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 RUNX3Q13761 415 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 SELPLGQ14242 412 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 PLEKHS1Q5SXH7 462 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 SUSD1Q6UWL2 747 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 KIAA2013Q8IYS2 634 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 MCOLN3Q8TDD5 553 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 UBTD2Q8WUN7 234 aa13.21□□□□□ -0.29
VMP1-201ENST00000262291 LRTOMTQ8WZ04 291 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms