RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 ITM2CQ9NQX7 267 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 DLGAP4Q9Y2H0 992 aa17.06■□□□□ 0.32
TRAM1-201ENST00000262213 ARIH1Q9Y4X5 557 aaPredicted RBP17.06■□□□□ 0.32
TRAM1-201ENST00000262213 TBX1O43435 398 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 RECQL5O94762 991 aaPredicted RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 DLGAP3O95886 979 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 ESR1P03372 595 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 ALPIP09923 528 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 BCKDHAP12694 445 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 HOXC8P31273 242 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 CLK1P49759 484 aaKnown RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 SELENBP1Q13228 472 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 CTXN3Q4LDR2 81 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 DOK6Q6PKX4 331 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 RASAL3Q86YV0 1011 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 Q8N9G6 341 aaPredicted RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 TTC29Q8NA56 475 aaPredicted RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 GPR63Q9BZJ6 419 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 AMBNQ9NP70 447 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 TMEM45AQ9NWC5 275 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 ATP11BQ9Y2G3 1177 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 DHRS7Q9Y394 339 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 A8MX80 341 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 RETP07949 1114 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 S100A3P33764 101 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 PTGER3P43115 390 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 NEK2P51955 445 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 HUNKP57058 714 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 RFX4Q33E94 735 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 ATG16L2Q8NAA4 619 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 REXO5Q96IC2 774 aaKnown RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 C8orf48Q96LL4 319 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 BTBD2Q9BX70 525 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 CLMPQ9H6B4 373 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 ACOT13Q9NPJ3 140 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 FBXO8Q9NRD0 319 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 GPRC5BQ9NZH0 403 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
TRAM1-201ENST00000262213 PCDHB9Q9Y5E1 797 aa17.05■□□□□ 0.32
TRAM1-201ENST00000262213 EFCAB9A8MZ26 197 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 DNAJB5O75953 348 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 NRIP1P48552 1158 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 SGSHP51688 502 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ZCCHC8Q6NZY4 707 aaKnown RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 SHQ1Q6PI26 577 aaKnown RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 STARD8Q92502 1023 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 CPPED1Q9BRF8 314 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 KIAA1522Q9P206 1035 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 NBNO60934 754 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF623O75123 536 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 FKBP9O95302 570 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 DBTP11182 482 aaKnown RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ITGAMP11215 1152 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 EFNA1P20827 205 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 KRT20P35900 424 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ALDH7A1P49419 539 aaKnown RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ARHGDIAP52565 204 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 FCGRTP55899 365 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 FOXD4Q12950 439 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ARHGEF7Q14155 803 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 NFE2Q16621 373 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 Q6ZPB1 254 aaPredicted RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 FKBP9P1Q75LS8 142 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 HORMAD1Q86X24 394 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 POC5Q8NA72 575 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 OR6K2Q8NGY2 324 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 SLIRPQ9GZT3 109 aaKnown RBP17.04■□□□□ 0.32
TRAM1-201ENST00000262213 CLPBQ9H078 707 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 CRISPLD1Q9H336 500 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 DUSP21Q9H596 190 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 LATS2Q9NRM7 1088 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 ANKMY1Q9P2S6 941 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 PRSS21Q9Y6M0 314 aa17.04■□□□□ 0.32
TRAM1-201ENST00000262213 FAM220BPB1ANY3 271 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 SLC28A1O00337 649 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MANBAO00462 879 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 SLC25A14O95258 325 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 TACR1P25103 407 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 FAM189BP81408 668 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 IL18R1Q13478 541 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 OR2T5Q6IEZ7 315 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ZNF551Q7Z340 670 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 TMEM132CQ8N3T6 1108 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 OR2T29Q8NH02 315 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 ADGRE3Q9BY15 652 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 FAM126AQ9BYI3 521 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MAGEH1Q9H213 219 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 DCSTAMPQ9H295 470 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 PGLSO95336 258 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 GLUD1P00367 558 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 RHOCP08134 193 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 GTF2E2P29084 291 aaKnown RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 CLCN4P51793 760 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MAD2L1Q13257 205 aaPredicted RBP17.03■□□□□ 0.32
TRAM1-201ENST00000262213 MORN1Q5T089 497 aa17.03■□□□□ 0.32
TRAM1-201ENST00000262213 C6orf183Q5T699 404 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms