RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 IRGCQ6NXR0 463 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 RPS27LQ71UM5 84 aaKnown RBP26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 CEP76Q8TAP6 659 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 FERD3LQ96RJ6 166 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 PARVBQ9HBI1 364 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 CD274Q9NZQ7 290 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 OARD1Q9Y530 152 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 PCDH15Q96QU1 1955 aa26.74■■□□□ 1.87
SMARCD3-201ENST00000262188 F3P13726 295 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 RPIAP49247 311 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 AGTR2P50052 363 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 PFKFB4Q16877 469 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ABRAXAS1Q6UWZ7 409 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ZYG11AQ6WRX3 759 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ZCCHC23Q6ZST2 131 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 NAGSQ8N159 534 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ATOH1Q92858 354 aaPredicted RBP26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 NSRP1Q9H0G5 558 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 INTS9Q9NV88 658 aaKnown RBP26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 DOLKQ9UPQ8 538 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ASB1Q9Y576 335 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 A8MT66 165 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 MYL2P10916 166 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC18A1P54219 525 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 IL17FQ96PD4 163 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 ARL15Q9NXU5 204 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 PCOLCE2Q9UKZ9 415 aa26.73■■□□□ 1.87
SMARCD3-201ENST00000262188 SIX3O95343 332 aaPredicted RBP26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 TPBGLP0DKB5 382 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 GFAPP14136 432 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC19A1P41440 591 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 ZXDCQ2QGD7 858 aaPredicted RBP26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 CES4AQ5XG92 561 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 PTGR2Q8N8N7 351 aaPredicted RBP26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 ZDHHC1Q8WTX9 485 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 LOXL4Q96JB6 756 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 PKP4Q99569 1192 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 EGFL8Q99944 293 aa26.72■■□□□ 1.87
SMARCD3-201ENST00000262188 ARHGAP33O14559 1287 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 CATP04040 527 aaKnown RBP26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 BPGMP07738 259 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 MTHFD1P11586 935 aaKnown RBP26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 CYP2A7P20853 494 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 HALP42357 657 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 ARRB1P49407 418 aaPredicted RBP26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 GRB7Q14451 532 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 ZNF423Q2M1K9 1284 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 IYDQ6PHW0 289 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 C17orf50Q8WW18 174 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 CCDC134Q9H6E4 229 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 ITGB1BP2Q9UKP3 347 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 A0A1B0GTQ1 180 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 GNAZP19086 355 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 MAP4P27816 1152 aaKnown RBP26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 SP140Q13342 867 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 UNC5DQ6UXZ4 953 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 WASH2PQ6VEQ5 465 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 GKN2Q86XP6 184 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 C2orf73Q8N5S3 287 aaPredicted RBP26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 PPFIBP2Q8ND30 876 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 SLC37A2Q8TED4 501 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 WASH6PQ9NQA3 447 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 NCKIPSDQ9NZQ3 722 aa26.71■■□□□ 1.87
SMARCD3-201ENST00000262188 ATP6V1G1O75348 118 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 MYF5P13349 255 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 ENGP17813 658 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 BGNP21810 368 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 EPHA8P29322 1005 aaPredicted RBP26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 RXRGP48443 463 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 MAZP56270 477 aaKnown RBP26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 SF3A2Q15428 464 aaKnown RBP26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 PLA2G2CQ5R387 149 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 LAIR1Q6GTX8 287 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 OR5K2Q8NHB8 316 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 MCOLN3Q8TDD5 553 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 NCSTNQ92542 709 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 MUC6Q6W4X9 2439 aa26.7■■□□□ 1.86
SMARCD3-201ENST00000262188 LMO7DNF2Z398 122 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 SLC16A5O15375 505 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 TAPBPO15533 448 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 GIMD1P0DJR0 217 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 GDF5P43026 501 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 CCR10P46092 362 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 NCALDP61601 193 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 KRT33BQ14525 404 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 RABEPKQ7Z6M1 372 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ZNF761Q86XN6 746 aaPredicted RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 NUDCD3Q8IVD9 361 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 FBXO39Q8N4B4 442 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ZNF317Q96PQ6 595 aaPredicted RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 RAB3IPQ96QF0 476 aaPredicted RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 NUSAP1Q9BXS6 441 aaKnown RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 TRIT1Q9H3H1 467 aaKnown RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 XKR8Q9H6D3 395 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 PCDHGA5Q9Y5G8 931 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 SLC16A8O95907 504 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ANXA6P08133 673 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 ATP5F1P24539 256 aaPredicted RBP26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 DPP6P42658 865 aa26.69■■□□□ 1.86
SMARCD3-201ENST00000262188 GALNTL6Q49A17 601 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms