RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 IMPA2O14732 288 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 AP1G1O43747 822 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 VCLP18206 1134 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 PIK3CGP48736 1102 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 FOXK1P85037 733 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 VASNQ6EMK4 673 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 L3MBTL4Q8NA19 623 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 FLRT3Q9NZU0 649 aa5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 KIAA1522Q9P206 1035 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 TMEFF2Q9UIK5 374 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-201ENST00000260810 KDM4EB2RXH2 506 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ADH1AP07327 375 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 NGFRP08138 427 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PPP2R1BP30154 601 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 MC4RP32245 332 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CSTF1Q05048 431 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 NAPEPLDQ6IQ20 393 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ZYG11AQ6WRX3 759 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 OTUD6BQ8N6M0 293 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM13CQ8NE31 585 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 GPR32P1Q8NGA4 272 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ACDQ96AP0 544 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 INPP5KQ9BT40 448 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ROPN1BQ9BZX4 212 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 VPS11Q9H270 941 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 AKTIPQ9H8T0 292 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ROPN1Q9HAT0 212 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PCMTD2Q9NV79 361 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ANKRD10Q9NXR5 420 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 FLNAP21333 2647 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 DVL2O14641 736 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 B4GAT1O43505 415 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RANBP1P43487 201 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 GRIA4P48058 902 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PCBP4P57723 403 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 C21orf58P58505 322 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 C19orf57Q0VDD7 668 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 BNIP3Q12983 259 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ITGA9Q13797 1035 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RCAN2Q14206 197 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ARHGAP22Q7Z5H3 698 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 DCP1BQ8IZD4 617 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CARNMT1Q8N4J0 409 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 GTF2H4Q92759 462 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CTHRC1Q96CG8 243 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC29A1Q99808 456 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 FRMD8P1Q9BZ68 369 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CEP44Q9C0F1 390 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PDP2Q9P2J9 529 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 DPP7Q9UHL4 492 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 ZNF839A8K0R7 811 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRTM2O43300 516 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 TSHRP16473 764 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PFKLP17858 780 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 F8A1P23610 371 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PDK1Q15118 436 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 PCBP2Q15366 365 aaKnown RBP eCLIP5.43□□□□□ -1.542e-6■■■■□ 23.1
TOPBP1-201ENST00000260810 KLHL38Q2WGJ6 581 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CARD16Q5EG05 197 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 KBTBD6Q86V97 674 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RNF34Q969K3 372 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 LRRC61Q9BV99 259 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CADP27708 2225 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 A0A1W2PPC1 479 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 TRIM38O00635 465 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RNGTTO60942 597 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 URODP06132 367 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 KLK2P20151 261 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CA8P35219 290 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RASSF2P50749 326 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 CDH17Q12864 832 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 FASTKD1Q53R41 847 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 SCIMPQ6UWF3 145 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 GDPD4Q6W3E5 623 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 RTL10Q7L3V2 364 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 KIF2BQ8N4N8 673 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 STON2Q8WXE9 905 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 C7orf34Q96L11 122 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 DERL2Q9GZP9 239 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 NACA2Q9H009 215 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 SLC40A1Q9NP59 571 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 GEMIN8Q9NWZ8 242 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 EIF2B4Q9UI10 523 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 TRHDEQ9UKU6 1024 aa5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 UTP11Q9Y3A2 253 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-201ENST00000260810 FAM95CA0A1B0GW59 222 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 NPEPPSL1A6NEC2 478 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RFPL3O75679 317 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 RPP40O75818 363 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MBL2P11226 248 aaPredicted RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 ITGA1P56199 1179 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 HDXQ7Z353 690 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 PRICKLE2Q7Z3G6 844 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MFN1Q8IWA4 741 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 IFT20Q8IY31 132 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 CELF5Q8N6W0 485 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 GPBAR1Q8TDU6 330 aa5.42□□□□□ -1.54
TOPBP1-201ENST00000260810 MRRFQ96E11 262 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms