RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.28■□□□□ 0.2
SDCBP-201ENST00000260130 OR5K3A6NET4 321 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 A8MU76 341 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 AGRPO00253 132 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 PLD2O14939 933 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 MPP2Q14168 576 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 UNC5DQ6UXZ4 953 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 ARHGAP22Q7Z5H3 698 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 LSMEM2Q8N112 164 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 SIDT2Q8NBJ9 832 aaKnown RBP16.27■□□□□ 0.2
SDCBP-201ENST00000260130 SKA2Q8WVK7 121 aaPredicted RBP16.27■□□□□ 0.2
SDCBP-201ENST00000260130 NDNQ99608 321 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 SLC30A3Q99726 388 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 TDRKHQ9Y2W6 561 aaKnown RBP16.27■□□□□ 0.2
SDCBP-201ENST00000260130 DHRS7Q9Y394 339 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 LOXL2Q9Y4K0 774 aa16.27■□□□□ 0.2
SDCBP-201ENST00000260130 OR6C74A6NCV1 312 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 VPS26AO75436 327 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 RPN2P04844 631 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 GPX6P59796 221 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 TTLL9Q3SXZ7 439 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 ACSBG2Q5FVE4 666 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 IRGCQ6NXR0 463 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 SLC26A11Q86WA9 606 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 OOSP2Q86WS3 158 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 INPP5DQ92835 1189 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 KLHL29Q96CT2 875 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 PRR11Q96HE9 360 aaPredicted RBP16.27■□□□□ 0.19
SDCBP-201ENST00000260130 CNTNAP3BQ96NU0 1288 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 GPR21Q99679 349 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 CNTNAP3Q9BZ76 1288 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 EURLQ9NYK6 297 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 DKK4Q9UBT3 224 aa16.27■□□□□ 0.19
SDCBP-201ENST00000260130 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 PMS2P1A4D2B8 440 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 CAPNS1P04632 268 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 CSTF2P33240 577 aaKnown RBP eCLIP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 SKIV2L2P42285 1042 aaKnown RBP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 ABCG1P45844 678 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 ZKSCAN8Q15776 578 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 UGT3A1Q6NUS8 523 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 STRA8Q7Z7C7 330 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 AMIGO1Q86WK6 493 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 TDRPQ86YL5 185 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 AGBL5Q8NDL9 886 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 FOPNLQ96NB1 174 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 NSMCE4AQ9NXX6 385 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 TAS2R13Q9NYV9 303 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 CORO1CQ9ULV4 474 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 PSAT1Q9Y617 370 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 EXOC1LA0A1B0GW35 172 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 TOX3O15405 576 aaPredicted RBP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 KDM1AO60341 852 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 BRINP1O60477 761 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 JMJD7P0C870 316 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 HGFP14210 728 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 KLHL38Q2WGJ6 581 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 RBM20Q5T481 1227 aaKnown RBP16.26■□□□□ 0.19
SDCBP-201ENST00000260130 ARMC6Q6NXE6 501 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 CD200R1Q8TD46 325 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 CDKL2Q92772 493 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 SLC46A1Q96NT5 459 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 NRTNQ99748 197 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 PITPNM3Q9BZ71 974 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 XKR8Q9H6D3 395 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 SMYD2Q9NRG4 433 aa16.26■□□□□ 0.19
SDCBP-201ENST00000260130 TMEM8BA6NDV4 472 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 FOXO6A8MYZ6 492 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 DXOO77932 396 aaKnown RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 MATN4O95460 622 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 ANKRD34CP0C6C1 535 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TPBGLP0DKB5 382 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 POLR2CP19387 275 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TAC1P20366 129 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 RBMS1P29558 406 aaKnown RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 SHMT2P34897 504 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 PPP1CAP62136 330 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 KCNJ2P63252 427 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TIAL1Q01085 375 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 PRKAA1Q13131 559 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TTC23LQ6PF05 361 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 IGF2-ASQ6U949 168 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 FAM92BQ6ZTR7 304 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 DCUN1D3Q8IWE4 304 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 PPCSQ9HAB8 311 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 SENP1Q9P0U3 644 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TRMT6Q9UJA5 497 aaKnown RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 TSR3Q9UJK0 312 aaKnown RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 ICKQ9UPZ9 632 aa16.25■□□□□ 0.19
SDCBP-201ENST00000260130 RUVBL2Q9Y230 463 aaKnown RBP16.25■□□□□ 0.19
SDCBP-201ENST00000260130 KIF1CO43896 1103 aaKnown RBP16.24■□□□□ 0.19
SDCBP-201ENST00000260130 SPAG6O75602 509 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 PIAS1O75925 651 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 TNFSF15O95150 251 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CBSLP0DN79 551 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CD9P21926 228 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CBSP35520 551 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 SLC18A1P54219 525 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CDKN2DP55273 166 aa16.24■□□□□ 0.19
SDCBP-201ENST00000260130 CACHD1Q5VU97 1274 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms