RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 RP1P56715 2156 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SDK2Q58EX2 2172 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 TSC2P49815 1807 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 H3BNX3 289 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 GREM1O60565 184 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SLC6A2P23975 617 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 PSMA4P25789 261 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 NSG1P42857 185 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 CLCN4P51793 760 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 OCA2Q04671 838 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 DLX2Q07687 328 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SIM2Q14190 667 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 EGFLAMQ63HQ2 1017 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 TLDC1Q6P9B6 456 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 FBXO46Q6PJ61 603 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 CCDC81Q6ZN84 652 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MEX3DQ86XN8 651 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 PROKR1Q8TCW9 393 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 COL26A1Q96A83 441 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF689Q96CS4 500 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 PANX1Q96RD7 426 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MCMBPQ9BTE3 642 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 RUBCNLQ9H714 662 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ANKRA2Q9H9E1 313 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MEAF6Q9HAF1 191 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 IL36AQ9UHA7 158 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MAGEB17A8MXT2 336 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 FKBP6O75344 327 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 PRKRAO75569 313 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 OTCP00480 354 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 GNRH1P01148 92 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ASGR2P07307 311 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 UROSP10746 265 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF8P17098 575 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 CDKN2CP42773 168 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 OR1E2P47887 323 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ACSM2AQ08AH3 577 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MAPRE2Q15555 327 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 INO80DQ53TQ3 878 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 ACSM2BQ68CK6 577 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 WDR53Q7Z5U6 358 aaPredicted RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 C1orf52Q8N6N3 182 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 RASGEF1AQ8N9B8 481 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 TMIGD2Q96BF3 282 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 FAM120BQ96EK7 910 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 NSMCE2Q96MF7 247 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 FCRL4Q96PJ5 515 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 MAGEE1Q9HCI5 957 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 UBAP1Q9NZ09 502 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 TMPRSS11EQ9UL52 423 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 OAS3Q9Y6K5 1087 aaKnown RBP8.87□□□□□ -0.99
CKAP2-201ENST00000258607 NLRC5Q86WI3 1866 aa8.87□□□□□ -0.99
CKAP2-201ENST00000258607 M0R129 80 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 NUDT7P0C024 238 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 LINGO3P0C6S8 592 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 TPRP12270 2363 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 IL10P22301 178 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ALDH4A1P30038 563 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SLC19A1P41440 591 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CSNK1DP48730 415 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SLC20A2Q08357 652 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ZXDCQ2QGD7 858 aaPredicted RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 TYSND1Q2T9J0 566 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 PYCR3Q53H96 274 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SAMD4BQ5PRF9 694 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 METTL21CQ5VZV1 264 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ELMSAN1Q6PJG2 1045 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 FAM129CQ86XR2 697 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SMYD1Q8NB12 490 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 OR5AR1Q8NGP9 310 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SGCDQ92629 289 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ARMC5Q96C12 935 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CCT7Q99832 543 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ROGDIQ9GZN7 287 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ING2Q9H160 280 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 TRIM39Q9HCM9 518 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 RASSF1Q9NS23 344 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 RHCGQ9UBD6 479 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 SH2B3Q9UQQ2 575 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 EIF3LQ9Y262 564 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MAP4K5Q9Y4K4 846 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 C7orf72A4D263 438 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 K7EPI3 171 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 HS6ST1O60243 411 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 POP7O75817 140 aaKnown RBP8.86□□□□□ -0.99
CKAP2-201ENST00000258607 MLYCDO95822 493 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 C8orf89P0DMQ9 161 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 TIMP2P16035 220 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 POU1F1P28069 291 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 S100A3P33764 101 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 IL12RB1P42701 662 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CRATP43155 626 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 LRP8Q14114 963 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ZNF234Q14588 700 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 CACHD1Q5VU97 1274 aa8.86□□□□□ -0.99
CKAP2-201ENST00000258607 ERAP2Q6P179 960 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms