RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 REXO5Q96IC2 774 aaKnown RBP13.19□□□□□ -0.3
VHL-201ENST00000256474 ZDHHC6Q9H6R6 413 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 ABCB10Q9NRK6 738 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 FAIMQ9NVQ4 179 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 FNIP2Q9P278 1114 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 GNPTGQ9UJJ9 305 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 ABCG2Q9UNQ0 655 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 SH3GLB1Q9Y371 365 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 H0Y858 1186 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 NDUFS2O75306 463 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 TULP3O75386 442 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 HNF1BP35680 557 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 CLECL1Q8IZS7 167 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 ABHD11Q8NFV4 315 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
VHL-201ENST00000256474 HTRA1Q92743 480 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 MAL2Q969L2 176 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 C1orf109Q9NX04 203 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 ZNF236Q9UL36 1845 aa13.19□□□□□ -0.3
VHL-201ENST00000256474 MANBAO00462 879 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 KDM1AO60341 852 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 CLPXO76031 633 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 SEC24AO95486 1093 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 VNN2O95498 520 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 CYP4F8P98187 520 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 SLC14A1Q13336 389 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 NFATC2Q13469 925 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 DCDC5Q6ZRR9 648 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 ZCCHC7Q8N3Z6 543 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 OR13F1Q8NGS4 319 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 APIPQ96GX9 242 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 RBM4BQ9BQ04 359 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 RBM4Q9BWF3 364 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 VNN3Q9NY84 501 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 ILVBLA1L0T0 632 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 SLC1A7O00341 560 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 SYN3O14994 580 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 RECQL5O94762 991 aaPredicted RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 ANXA5P08758 320 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PRR35P0CG20 571 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 NPTX1Q15818 432 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 UAP1L1Q3KQV9 507 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 CEP68Q76N32 757 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PAGE2Q7Z2X7 111 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 GALNT7Q86SF2 657 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 STK40Q8N2I9 435 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 TMEM132CQ8N3T6 1108 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PCSK9Q8NBP7 692 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 ZNF548Q8NEK5 533 aaPredicted RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 CD244Q9BZW8 370 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 C6orf62Q9GZU0 229 aaPredicted RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 CLEC4EQ9ULY5 219 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 SAP18O00422 153 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 PRSS23O95084 383 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 EOMESO95936 686 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 UGT2B4P06133 528 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 COX7A2P14406 83 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PPP3CCP48454 512 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PTCHD3Q3KNS1 767 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 ZFP90Q8TF47 636 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 RAB2BQ8WUD1 216 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 MBOAT4Q96T53 435 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 MARCH5Q9NX47 278 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
VHL-201ENST00000256474 CPQQ9Y646 472 aa13.18□□□□□ -0.3
VHL-201ENST00000256474 CLDN9O95484 217 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 DBTP11182 482 aaKnown RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 BPIP17213 487 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 IDUAP35475 653 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 MAGEA10P43363 369 aaPredicted RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 PHC1P78364 1004 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 RING1Q06587 406 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 RIMKLAQ8IXN7 391 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 ACPTQ9BZG2 426 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 KLHL25Q9H0H3 589 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 RNF186Q9NXI6 227 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 RAPGEFL1Q9UHV5 662 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 A8MU76 341 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 SH3BP5O60239 455 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 GALTP07902 379 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 POU1F1P28069 291 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 MAGEA11P43364 429 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 SKIV2LQ15477 1246 aaKnown RBP13.17□□□□□ -0.3
VHL-201ENST00000256474 INAQ16352 499 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 RGMBQ6NW40 437 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 MSRB3Q8IXL7 192 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
VHL-201ENST00000256474 PAK1IP1Q9NWT1 392 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms