RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 WDR47O94967 919 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 PARNO95453 639 aaKnown RBP24.91■■□□□ 1.58
RAB40C-201ENST00000248139 ANXA5P08758 320 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 LDLRAP1Q5SW96 308 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 BROXQ5VW32 411 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 ANKRD26P1Q6NSI1 321 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 SPARTQ8N0X7 666 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 LEMD2Q8NC56 503 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 CDC26Q8NHZ8 85 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 ACDQ96AP0 544 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 APOLD1Q96LR9 279 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 TRPS1Q9UHF7 1281 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 CDH7Q9ULB5 785 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 VPS4AQ9UN37 437 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 DCTP40126 519 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 NFATC3Q12968 1075 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 OR4F3Q6IEY1 312 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 NEK5Q6P3R8 708 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 Q6ZNB5 142 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 HS6ST3Q8IZP7 471 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 CMTM8Q8IZV2 173 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 FNDC8Q8TC99 324 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 MYOCQ99972 504 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 BBS2Q9BXC9 721 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 CCDC90BQ9GZT6 254 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 ELOVL6Q9H5J4 265 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 DCAF13Q9NV06 445 aaKnown RBP24.91■■□□□ 1.58
RAB40C-201ENST00000248139 SLC22A14Q9Y267 594 aa24.91■■□□□ 1.58
RAB40C-201ENST00000248139 XPNPEP2O43895 674 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 CPNE6O95741 557 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 ZNF682O95780 498 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 S100A3P33764 101 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 PTSQ03393 145 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 MAD2L1Q13257 205 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 PTCHD3Q3KNS1 767 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 C6orf141Q5SZD1 244 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 PARP8Q8N3A8 854 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 BEND7Q8N7W2 519 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 CNIH3Q8TBE1 160 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 IL21Q9HBE4 155 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 WARS2Q9UGM6 360 aaKnown RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 TRBV5-3A0A0A0MS03 114 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 ZNF701M0R085 212 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 GABRR2P28476 465 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 MLLT10P55197 1068 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 DOK6Q6PKX4 331 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 ZNF420Q8TAQ5 688 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 PNPT1Q8TCS8 783 aaKnown RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 FOXJ1Q92949 421 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 PAK1IP1Q9NWT1 392 aaPredicted RBP24.9■■□□□ 1.58
RAB40C-201ENST00000248139 DGKBQ9Y6T7 804 aa24.9■■□□□ 1.58
RAB40C-201ENST00000248139 GFRA2O00451 464 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 DPY19L1Q2PZI1 675 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 ZNF648Q5T619 568 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 RNF168Q8IYW5 571 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 ZNF555Q8NEP9 628 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 TRMT2BQ96GJ1 504 aaKnown RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 COPS8Q99627 209 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 CPPED1Q9BRF8 314 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 SLC32A1Q9H598 525 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 ZBTB11O95625 1053 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 SDC1P18827 310 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 PSMD7P51665 324 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 PLA2G16P53816 162 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 GRAMD4Q6IC98 578 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 GAREM2Q75VX8 874 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 GLB1L3Q8NCI6 653 aaPredicted RBP24.89■■□□□ 1.58
RAB40C-201ENST00000248139 TMPRSS11EQ9UL52 423 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 INSL5Q9Y5Q6 135 aa24.89■■□□□ 1.58
RAB40C-201ENST00000248139 SCN8AQ9UQD0 1980 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 PER2O15055 1255 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 ABCB7O75027 752 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 KRT6AP02538 564 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 KRT6BP04259 564 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 CCNA2P20248 432 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 NSG1P42857 185 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 KRT6CP48668 564 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 GTF2H3Q13889 308 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 PLEKHG6Q3KR16 790 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 GPR149Q86SP6 731 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 P2RY13Q9BPV8 354 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 ZDHHC6Q9H6R6 413 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 ABCB8Q9NUT2 735 aa24.89■■□□□ 1.57
RAB40C-201ENST00000248139 LOC100130705A0A1B0GUX0 176 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 IGSF6O95976 241 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 SOD2P04179 222 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 UGT2B4P06133 528 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 SERPINA4P29622 427 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 SIM2Q14190 667 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-201ENST00000248139 TTLL9Q3SXZ7 439 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 OR2AP1Q8NGE2 309 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 YTHDF1Q9BYJ9 559 aaKnown RBP24.88■■□□□ 1.57
RAB40C-201ENST00000248139 KCTD5Q9NXV2 234 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 ERVK-11Q9UQG0 969 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.88■■□□□ 1.57
RAB40C-201ENST00000248139 SEC14L2O76054 403 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 SCELO95171 688 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 GZMMP51124 257 aa24.88■■□□□ 1.57
RAB40C-201ENST00000248139 DDX39BQ13838 428 aaKnown RBP24.88■■□□□ 1.57
RAB40C-201ENST00000248139 TTC23Q5W5X9 447 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms