RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 VPS4BO75351 444 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 SERPINF2P08697 491 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 HSPA8P11142 646 aaKnown RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CKBP12277 381 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 GYPEP15421 78 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CD1EP15812 388 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CD1DP15813 335 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF37AP17032 561 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 IL12RB1P42701 662 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 KIR2DL3P43628 341 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 OR1G1P47890 313 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TM4SF4P48230 202 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 FLT3LGP49771 235 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 RRADP55042 308 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CDKN2DP55273 166 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 PKNOX1P55347 436 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 C1QTNF8P60827 252 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 MAXP61244 160 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ATP6V0D1P61421 351 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 RHDQ02161 417 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ELAVL2Q12926 359 aaKnown RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 GRIK2Q13002 908 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 GPR17Q13304 367 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ADAM15Q13444 863 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 IHHQ14623 411 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 LRRC36Q1X8D7 754 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 AGKQ53H12 422 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 UNC50Q53HI1 259 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 RAP1GAP2Q684P5 730 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM207Q6UWW9 146 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 EFL1Q7Z2Z2 1120 aaKnown RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 KDELC2Q7Z4H8 507 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF761Q86XN6 746 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 HMGCLL1Q8TB92 370 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF483Q8TF39 744 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 C19orf60Q96EN9 201 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 C1GALT1C1Q96EU7 318 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TMA16Q96EY4 203 aaKnown RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 RPRD1AQ96P16 312 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 UHRF1Q96T88 793 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 NPAS2Q99743 824 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 SEMA3CQ99985 751 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 MGME1Q9BQP7 344 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 EFHD1Q9BUP0 239 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TTLL2Q9BWV7 592 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 ALG9Q9H6U8 611 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM45AQ9NWC5 275 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 TMEM181Q9P2C4 612 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 MARCH4Q9P2E8 410 aaPredicted RBP7.75□□□□□ -1.17
CXCR4-201ENST00000241393 CD300AQ9UGN4 299 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 PADI4Q9UM07 663 aa7.75□□□□□ -1.17
CXCR4-201ENST00000241393 C15orf38-AP3S2A0A0A6YYH1 394 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TCRBV3S1A0A5B6 114 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 DYTNA2CJ06 578 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 CCDC162PA2VCL2 907 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 CAPN8A6NHC0 703 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 F5H5T6 163 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 H7C4K7 107 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 FBP2O00757 339 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 MRASO14807 208 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 KERAO60938 352 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SRP72O76094 671 aaKnown RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SUPT7LO94864 414 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 MATN4O95460 622 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 STAMBPO95630 424 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 GOT2P00505 430 aaKnown RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TACR2P21452 398 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SLC7A1P30825 629 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 OR1E1P30953 314 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 PEX19P40855 299 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 STC1P52823 247 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 DUSP2Q05923 314 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 FOXM1Q08050 763 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TAF10Q12962 218 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 USP41Q3LFD5 358 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 UGT3A2Q3SY77 523 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 C10orf120Q5SQS8 335 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 XP32Q5T750 250 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SDHAF4Q5VUM1 108 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF549Q6P9A3 640 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 AFTPHQ6ULP2 937 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ARPINQ7Z6K5 226 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SPATA24Q86W54 205 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ZNF354CQ86Y25 554 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 LGI4Q8N135 537 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 OR4L1Q8NH43 312 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 OVCA2Q8WZ82 227 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 USP13Q92995 863 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 KIAA1191Q96A73 305 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 PTERQ96BW5 349 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 PHF21BQ96EK2 531 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 MVB12AQ96EY5 273 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TBATAQ96M53 351 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 PSKH2Q96QS6 385 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 TRIB3Q96RU7 358 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 ATOH8Q96SQ7 321 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 HOPXQ9BPY8 73 aaPredicted RBP7.74□□□□□ -1.17
CXCR4-201ENST00000241393 SPATA16Q9BXB7 569 aa7.74□□□□□ -1.17
CXCR4-201ENST00000241393 C1QTNF3Q9BXJ4 246 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms