RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 MRM3Q9HC36 420 aaKnown RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 SCOCQ9UIL1 159 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ITM2BQ9Y287 266 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 PRSS21Q9Y6M0 314 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 FRYQ5TBA9 3013 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MYOCOSA0A1B0GUC4 107 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 TM4SF5O14894 197 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 NPHS1O60500 1241 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CAPN1P07384 714 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 NCK1P16333 377 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 SERPINA4P29622 427 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 GCKP35557 465 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CCT8P50990 548 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 RAP1GDS1P52306 607 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 POLE2P56282 527 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 LAMB3Q13751 1172 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 NFYCQ13952 458 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ARTNQ5T4W7 220 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ZNF783Q6ZMS7 281 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MYO1HQ8N1T3 1032 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 C2orf73Q8N5S3 287 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ACTRT2Q8TDY3 377 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ISL2Q96A47 359 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 EID2BQ96D98 161 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 KLHDC7BQ96G42 594 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MYCBPQ99417 103 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 WRAP53Q9BUR4 548 aaKnown RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 MMADHCQ9H3L0 296 aaPredicted RBP8.46□□□□□ -1.06
VPS4B-201ENST00000238497 ATP13A3Q9H7F0 1226 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 CROTQ9UKG9 612 aa8.46□□□□□ -1.06
VPS4B-201ENST00000238497 TDRD6O60522 2096 aaKnown RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 DOCK9Q9BZ29 2069 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 GLYATL1P3A0A0U1RQE8 302 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 SAC3D1A6NKF1 404 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 SCAMP1O15126 338 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 NRP2O60462 931 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 WFS1O76024 890 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 CD160O95971 181 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 EPOP01588 193 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 EFNA1P20827 205 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ATP6V1C1P21283 382 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 FDXRP22570 491 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 MSLNQ13421 630 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 SFT2D3Q587I9 215 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 METTL21CQ5VZV1 264 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 LRRC66Q68CR7 880 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 REP15Q6BDI9 236 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 FUBP1Q96AE4 644 aaKnown RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 CEP192Q8TEP8 1941 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 DPPA5A6NC42 116 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 NPIPB15A6NHN6 443 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 C16orf96A6NNT2 1141 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 TLR4O00206 839 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 POP4O95707 220 aaKnown RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ADRB3P13945 408 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 CD59P13987 128 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 MTHFD2P13995 350 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 CSRP1P21291 193 aaKnown RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 AKT2P31751 481 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 HTR6P50406 440 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 CCNG1P51959 295 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ZNF140P52738 457 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 DGKQP52824 942 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 BNC1Q01954 994 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ABRQ12979 859 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 TGFBIQ15582 683 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 MYLK3Q32MK0 819 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 RNF220Q5VTB9 566 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 PARS2Q7L3T8 475 aaKnown RBP8.45□□□□□ -1.06
VPS4B-201ENST00000238497 HORMAD1Q86X24 394 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 LKAAEAR1Q8TD35 194 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 PPM1MQ96MI6 270 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 TMEM74Q96NL1 305 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 SCNM1Q9BWG6 230 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 IPPKQ9H8X2 491 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 IL26Q9NPH9 171 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 WDR70Q9NW82 654 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 ARL15Q9NXU5 204 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 LHX3Q9UBR4 397 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 BTBD3Q9Y2F9 522 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 DTNAQ9Y4J8 743 aa8.45□□□□□ -1.06
VPS4B-201ENST00000238497 SYCE1LA8MT33 242 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 FFAR2O15552 330 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 TIPRLO75663 272 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 LRATO95237 230 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 ALDOCP09972 364 aaKnown RBP8.44□□□□□ -1.06
VPS4B-201ENST00000238497 THEGLP0DJG4 465 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 LBPP18428 481 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 RGS4P49798 205 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 NEK2P51955 445 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 KCNK10P57789 538 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 UFM1P61960 85 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 CDC16Q13042 620 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 MED21Q13503 144 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 RABL3Q5HYI8 236 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 PIP5KL1Q5T9C9 394 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 PEAR1Q5VY43 1037 aaPredicted RBP8.44□□□□□ -1.06
VPS4B-201ENST00000238497 GPRIN3Q6ZVF9 776 aa8.44□□□□□ -1.06
VPS4B-201ENST00000238497 Q6ZVL8 140 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms