RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 GADL1Q6ZQY3 521 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 USP45Q70EL2 814 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 XYLT1Q86Y38 959 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PGBD3Q8N328 593 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 CARNMT1Q8N4J0 409 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SLITRK2Q9H156 845 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 MAP10Q9P2G4 905 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 COQ4Q9Y3A0 265 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 MGAT4DA6NG13 374 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 OR2AT4A6NND4 320 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SHOXO15266 292 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 AP2A1O95782 977 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 MOCS2O96007 188 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-201ENST00000236192 FNTBP49356 437 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 CXCR4P61073 352 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 ABRQ12979 859 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 BAMBIQ13145 260 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SSX6Q7RTT6 188 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 SLC13A3Q8WWT9 602 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 IFT27Q9BW83 186 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 NFKBIZQ9BYH8 718 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 C20orf27Q9GZN8 174 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 WDCPQ9H6R7 721 aa12.62□□□□□ -0.39
VAMP4-201ENST00000236192 PSMD10O75832 226 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 HLA-DMAP28067 261 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 SMIM11AP58511 58 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 FPGSQ05932 587 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 AANATQ16613 207 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 Q3C1V9 767 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ATF7IP2Q5U623 682 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ZFP14Q9HCL3 533 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 POFUT2Q9Y2G5 429 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 BCL9LQ86UU0 1499 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ZDHHC11BP0C7U3 371 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 COX7A2P14406 83 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ACADLP28330 430 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 GMPSP49915 693 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 TXNRD3NBQ6F5E7 133 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 MGLLQ99685 303 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 NT5DC2Q9H857 520 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 AXIN2Q9Y2T1 843 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 GLYATL1P3A0A0U1RQE8 302 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 SYNDIG1LA6NDD5 238 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 RHPN2P1A8MT19 583 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 TXNL1O43396 289 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 OR10H3O60404 316 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 OXTRP30559 389 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 CSTF2P33240 577 aaKnown RBP eCLIP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 RRAS2P62070 204 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 GK2Q14410 553 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF460Q14592 562 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 HECTD2Q5U5R9 776 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 TSPYL5Q86VY4 417 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-201ENST00000236192 STYXQ8WUJ0 223 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 BTN2A2Q8WVV5 523 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 MAFIPQ8WZ33 124 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 RHBDF1Q96CC6 855 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 CLEC4AQ9UMR7 237 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF234Q14588 700 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 KCTD2Q14681 263 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 OLFML2AQ68BL7 652 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 TMEM161BQ8NDZ6 487 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 SHKBP1Q8TBC3 707 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 SLC30A3Q99726 388 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 PRKAB1Q9Y478 270 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
VAMP4-201ENST00000236192 CRATP43155 626 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 GTF2A2P52657 109 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 MLLT6P55198 1093 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 GBE1Q04446 702 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 C2orf80Q0P641 193 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 KEAP1Q14145 624 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 BAK1Q16611 211 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 AP5B1Q2VPB7 878 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 C10orf62Q5T681 223 aaPredicted RBP12.6□□□□□ -0.39
VAMP4-201ENST00000236192 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 RNF130Q86XS8 419 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 SIAH1Q8IUQ4 282 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 PIGBQ92521 554 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 PIGKQ92643 395 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ARL6Q9H0F7 186 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 OPTCQ9UBM4 332 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 CA5BQ9Y2D0 317 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 PCDHB5Q9Y5E4 795 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 A8MT66 165 aa12.6□□□□□ -0.39
VAMP4-201ENST00000236192 OTCP00480 354 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms