RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PCDHB11Q9Y5F2 797 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 PCM1Q15154 2024 aa12.26□□□□□ -0.45
LSM5-201ENST00000223084 TEX51A0A1B0GUA7 166 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 TCRBV9S1A1TA0A576 114 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 STMND1H3BQB6 276 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 PSIP1O75475 530 aaKnown RBP12.25□□□□□ -0.45
LSM5-201ENST00000223084 STK17BO94768 372 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 TIAF1O95411 115 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 MPC1LP0DKB6 136 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 LIPCP11150 499 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 SAT1P21673 171 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 CD9P21926 228 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 CD82P27701 267 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 CCNFP41002 786 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 FASTKQ14296 549 aaKnown RBP12.25□□□□□ -0.45
LSM5-201ENST00000223084 ZIC1Q15915 447 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 UGT3A1Q6NUS8 523 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 NEK10Q6ZWH5 1172 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 TIPARPQ7Z3E1 657 aaKnown RBP12.25□□□□□ -0.45
LSM5-201ENST00000223084 VASH2Q86V25 355 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 ZC3HC1Q86WB0 502 aaKnown RBP12.25□□□□□ -0.45
LSM5-201ENST00000223084 DTX1Q86Y01 620 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 RASGRP3Q8IV61 690 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 LRRN4CLQ8ND94 238 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 OR9A1PQ8NGU1 263 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 OR2L8Q8NGY9 312 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 EEF1AKMT1Q8WVE0 214 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 IFT81Q8WYA0 676 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 DPH1Q9BZG8 443 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 SPRY4Q9C004 299 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 LRRC4CQ9HCJ2 640 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 FAM114A2Q9NRY5 505 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 FGF21Q9NSA1 209 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 TAS2R13Q9NYV9 303 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 BTRCQ9Y297 605 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 VWA7Q9Y334 891 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 SEC16AO15027 2179 aa12.25□□□□□ -0.45
LSM5-201ENST00000223084 A0A0J9YY10 115 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FAM159BA6NKW6 160 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 RAD1O60671 282 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FLNBO75369 2602 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 SPAG6O75602 509 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 KIAA0754O94854 1291 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 SYF2O95926 243 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 CATP04040 527 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 CBSLP0DN79 551 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FGF5P12034 268 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 ENO3P13929 434 aaPredicted RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 FDXRP22570 491 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 PSMB5P28074 263 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 CBSP35520 551 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 SKIV2L2P42285 1042 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 ACY1Q03154 408 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 IL11RAQ14626 422 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 KIR2DS3Q14952 304 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 TMTC4Q5T4D3 741 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 UBAP2Q5T6F2 1119 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 PRAMEF17Q5VTA0 474 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FAM45BPQ6NSW5 357 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 SLC26A11Q86WA9 606 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 PPP1R3BQ86XI6 285 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 CARFQ8N187 725 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 CEP112Q8N8E3 955 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 C19orf47Q8N9M1 422 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 FAM45AQ8TCE6 357 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 MAGEC3Q8TD91 643 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 ASB11Q8WXH4 323 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 DLG3Q92796 817 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 NKD1Q969G9 470 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 LINGO1Q96FE5 620 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 TEFMQ96QE5 360 aaKnown RBP12.24□□□□□ -0.45
LSM5-201ENST00000223084 PKP4Q99569 1192 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 ZPBPQ9BS86 351 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 ULBP3Q9BZM4 244 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 CPNE5Q9HCH3 593 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FAM60AQ9NP50 221 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 PDE7BQ9NP56 450 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 RARRES3Q9UL19 164 aa12.24□□□□□ -0.45
LSM5-201ENST00000223084 FAM95CA0A1B0GW59 222 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 A0A1W2PPV9 198 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 TMEM150CB9EJG8 249 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 GFYI3L273 518 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 MYO1CO00159 1063 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 EFSO43281 561 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 HCRTR1O43613 425 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 DLGAP3O95886 979 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 C1QAP02745 245 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 GSTA2P09210 222 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 RGS4P49798 205 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 TUBB4BP68371 445 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 PDAP1Q13442 181 aaKnown RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 ZNF460Q14592 562 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■■■■■ 33.5
LSM5-201ENST00000223084 SLC5A12Q1EHB4 618 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 DEFB110Q30KQ9 67 aa12.23□□□□□ -0.45
LSM5-201ENST00000223084 GLE1Q53GS7 698 aaKnown RBP12.23□□□□□ -0.45
LSM5-201ENST00000223084 BROXQ5VW32 411 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms