RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 ABCA12Q86UK0 2595 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 CCDC162PA2VCL2 907 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 OR1I1O60431 355 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 ZNF189O75820 626 aaPredicted RBP15.13■□□□□ 0.01
NME3-201ENST00000219302 MAGP20916 626 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 ITGA3P26006 1051 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
NME3-201ENST00000219302 PKLRP30613 574 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 ARSFP54793 590 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 ELOAQ14241 798 aaKnown RBP15.13■□□□□ 0.01
NME3-201ENST00000219302 GRB7Q14451 532 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 NKG7Q16617 165 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 HIF1AQ16665 826 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 PRAMEF13Q5VWM6 474 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 C1QL3Q5VWW1 255 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 KIRREL2Q6UWL6 708 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 TTLL10Q6ZVT0 673 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 COX15Q7KZN9 410 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 FAM71DQ8N9W8 422 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 SPSB2Q99619 263 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 WDR54Q9H977 334 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 AGPAT4Q9NRZ5 378 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 NOVA2Q9UNW9 492 aaKnown RBP15.13■□□□□ 0.01
NME3-201ENST00000219302 HS3ST3B1Q9Y662 390 aa15.13■□□□□ 0.01
NME3-201ENST00000219302 A0A1B0GX78 115 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 CCDC78A2IDD5 438 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 E2F3O00716 465 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 ALOX12BO75342 701 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 OR56A5P0C7T3 313 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 CCR7P32248 378 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 TSFMP43897 325 aaKnown RBP15.12■□□□□ 0.01
NME3-201ENST00000219302 RAB28P51157 221 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 GDF10P55107 478 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 SPA17Q15506 151 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 DNAJC21Q5F1R6 531 aaKnown RBP15.12■□□□□ 0.01
NME3-201ENST00000219302 FCRL6Q6DN72 434 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 ARHGEF18Q6ZSZ5 1173 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 VRK3Q8IV63 474 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 SLC22A15Q8IZD6 547 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 LMNTD1Q8N9Z9 388 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 OR13J1Q8NGT2 312 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.12■□□□□ 0.01
NME3-201ENST00000219302 DLG3Q92796 817 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 CALR3Q96L12 384 aaKnown RBP15.12■□□□□ 0.01
NME3-201ENST00000219302 ZNF285Q96NJ3 590 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 LUC7LQ9NQ29 371 aaKnown RBP15.12■□□□□ 0.01
NME3-201ENST00000219302 IRAK4Q9NWZ3 460 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 IMPACTQ9P2X3 320 aa15.12■□□□□ 0.01
NME3-201ENST00000219302 DSCR3O14972 297 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 PSMD3O43242 534 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 PRICKLE3O43900 615 aaPredicted RBP15.11■□□□□ 0.01
NME3-201ENST00000219302 KDM1AO60341 852 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 GPC4O75487 556 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 CD9P21926 228 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 GRIA3P42263 894 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 SYTL3Q4VX76 610 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 CCDC38Q502W7 563 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 AGAP7PQ5VUJ5 663 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 C2orf73Q8N5S3 287 aaPredicted RBP15.11■□□□□ 0.01
NME3-201ENST00000219302 LRRC57Q8N9N7 239 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 DNAJB14Q8TBM8 379 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 GRHL3Q8TE85 626 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 DENND1AQ8TEH3 1009 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 FAR1Q8WVX9 515 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 AGAP4Q96P64 663 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 ALS2CR12Q96Q35 445 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 CUTCQ9NTM9 273 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 CDC23Q9UJX2 597 aa15.11■□□□□ 0.01
NME3-201ENST00000219302 CROCCQ5TZA2 2017 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 FITM1A5D6W6 292 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 VSTM2BA6NLU5 285 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 LRRTM2O43300 516 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 PIM1P11309 404 aaPredicted RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 MCM3P25205 808 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 CYLC1P35663 651 aaPredicted RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 CETN2P41208 172 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 CSE1LP55060 971 aaKnown RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 Q0VFX4 171 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 KLF1Q13351 362 aaPredicted RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 YOD1Q5VVQ6 348 aaPredicted RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 FIGLAQ6QHK4 219 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 ZNF534Q76KX8 674 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 PARP9Q8IXQ6 854 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 SLC34A3Q8N130 599 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 RNF214Q8ND24 703 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 OR52K1Q8NGK4 314 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 SLC35B2Q8TB61 432 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 HDAC10Q969S8 669 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 SLC22A18Q96BI1 424 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 IL17FQ96PD4 163 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 LACRTQ9GZZ8 138 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 LHPPQ9H008 270 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 MRM3Q9HC36 420 aaKnown RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 SLC2A6Q9UGQ3 507 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 RIMKLBQ9ULI2 386 aa15.1■□□□□ 0.01
NME3-201ENST00000219302 R3HDM2Q9Y2K5 976 aaKnown RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 REXO2Q9Y3B8 237 aaKnown RBP15.1■□□□□ 0.01
NME3-201ENST00000219302 EPN1Q9Y6I3 576 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms