RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RLN3Q8WXF3 142 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TRMOQ9BU70 441 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 IL21Q9HBE4 155 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RPRD1BQ9NQG5 326 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 NLE1Q9NVX2 485 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TRPC4Q9UBN4 977 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 LGALS13Q9UHV8 139 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TTC3P53804 2025 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CCDC182A6NF36 153 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 AXIN1O15169 862 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RNGTTO60942 597 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 C6P13671 934 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ADRB3P13945 408 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ALDH4A1P30038 563 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CAPZA2P47755 286 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ARRB1P49407 418 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CREB5Q02930 508 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 DENND5AQ6IQ26 1287 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 DNAJC5GQ8N7S2 189 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 OR2T3Q8NH03 318 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 GLYATL1Q969I3 302 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 SMIM14Q96QK8 99 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 BBS4Q96RK4 519 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 AARSD1Q9BTE6 412 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 VN1R3Q9BXE9 311 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RPS6KB2Q9UBS0 482 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 EIF2B4Q9UI10 523 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 C3orf18Q9UK00 162 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 MTF2Q9Y483 593 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CAPN8A6NHC0 703 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 B4DGG1 531 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 SNRPB2P08579 225 aaKnown RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 MPSTP25325 297 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 PPP2R1BP30154 601 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 SLC16A1P53985 500 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 AMZ1Q400G9 498 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF648Q5T619 568 aaPredicted RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 ZCCHC8Q6NZY4 707 aaKnown RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 CYP20A1Q6UW02 462 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 AADATQ8N5Z0 425 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 TFGQ92734 400 aaPredicted RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 ZHX1-C8orf76Q96EF9 292 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 CHFRQ96EP1 664 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 MRPL48Q96GC5 212 aaKnown RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 MYADMQ96S97 322 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 OSBPL10Q9BXB5 764 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 CCDC177Q9NQR7 707 aaPredicted RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 C8orf4Q9NR00 106 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 SPO11Q9Y5K1 396 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 PREPP48147 710 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 UBAP2LQ14157 1087 aaKnown RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 GRIN2CQ14957 1233 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 C11orf88Q6PI97 169 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 CASP12Q6UXS9 341 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 TMEM135Q86UB9 458 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 FITM2Q8N6M3 262 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 WDR36Q8NI36 951 aaKnown RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 DCAKDQ8WVC6 231 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 BTBD9Q96Q07 612 aa9.21□□□□□ -0.93
CCDC113-201ENST00000219299 WDR55Q9H6Y2 383 aaPredicted RBP9.21□□□□□ -0.93
CCDC113-201ENST00000219299 ATP6V1G1O75348 118 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 ZDHHC11BP0C7U3 371 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 HPGDP15428 266 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 PRKCHP24723 683 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 S100A3P33764 101 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 CHIT1Q13231 466 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 ATP13A5Q4VNC0 1218 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 ZNF542PQ5EBM4 170 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 LILRA6Q6PI73 481 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 GPR135Q8IZ08 494 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 PDPRQ8NCN5 879 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 WFDC5Q8TCV5 224 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 EEF1AKMT1Q8WVE0 214 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 C17orf50Q8WW18 174 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 PIGKQ92643 395 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 RTP4Q96DX8 246 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 HHIPQ96QV1 700 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 SRMSQ9H3Y6 488 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 MARCH4Q9P2E8 410 aaPredicted RBP9.21□□□□□ -0.94
CCDC113-201ENST00000219299 GMEB1Q9Y692 573 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 MYL12BO14950 172 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 SGTAO43765 313 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 GJB3O75712 270 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 ALDH6A1Q02252 535 aaKnown RBP9.21□□□□□ -0.94
CCDC113-201ENST00000219299 GPNMBQ14956 572 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 QPRTQ15274 297 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 AP5B1Q2VPB7 878 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 PSAPL1Q6NUJ1 521 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 RALGPS2Q86X27 583 aaPredicted RBP9.21□□□□□ -0.94
CCDC113-201ENST00000219299 BPIFB6Q8NFQ5 453 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 AIF1LQ9BQI0 150 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 CCM2Q9BSQ5 444 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 RTKNQ9BST9 563 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 SGK2Q9HBY8 427 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 TRNAU1APQ9NX07 287 aaKnown RBP9.21□□□□□ -0.94
CCDC113-201ENST00000219299 KLHL28Q9NXS3 571 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 PSME2Q9UL46 239 aa9.21□□□□□ -0.94
CCDC113-201ENST00000219299 GVINP1Q7Z2Y8 2422 aa9.2□□□□□ -0.94
CCDC113-201ENST00000219299 CDC7O00311 574 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms