RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ZC3HC1Q86WB0 502 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 STX12Q86Y82 276 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 C12orf29Q8N999 325 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SMG8Q8ND04 991 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 FAM46DQ8NEK8 389 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 FNDC8Q8TC99 324 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TRUB1Q8WWH5 349 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZNF641Q96N77 438 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 TTYH1Q9H313 450 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 IFT46Q9NQC8 304 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 NLGN3Q9NZ94 848 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SNX10Q9Y5X0 201 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 KANTRA0A1W2PQU2 76 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TISP43B9A030 160 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 RCBTB2O95199 551 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 GADD45GO95257 159 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 CD36P16671 472 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 HDCP19113 662 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TACR2P21452 398 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SYT16Q17RD7 645 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZNF404Q494X3 552 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 STEAP4Q687X5 459 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 TMCO2Q7Z6W1 182 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 CHERPQ8IWX8 916 aaKnown RBP4.33□□□□□ -1.72
CHD9-201ENST00000219084 C1orf127Q8N9H9 656 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PCDH19Q8TAB3 1148 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 SNX33Q8WV41 574 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 RGMAQ96B86 450 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 CGREF1Q99674 301 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 GPR21Q99679 349 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DUSP26Q9BV47 211 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 BTBD1Q9H0C5 482 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DCSTAMPQ9H295 470 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 DPAGT1Q9H3H5 408 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 MARK1Q9P0L2 795 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 CDH7Q9ULB5 785 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 PCDHB9Q9Y5E1 797 aa4.33□□□□□ -1.72
CHD9-201ENST00000219084 WNK3Q9BYP7 1800 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF33A0A0G2JMD5 474 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 RNF225M0QZC1 329 aaPredicted RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 STK25O00506 426 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 FFAR2O15552 330 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GRID2O43424 1007 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 NOBOXO60393 691 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PRAMEF10O60809 474 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 COQ9O75208 318 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SLITRK5O94991 958 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 NFATC1O95644 943 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 OXSR1O95747 527 aaPredicted RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 C1RP00736 705 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 IL3P08700 152 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 MYF6P23409 242 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GSTM2P28161 218 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 LILRA4P59901 499 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GALNT2Q10471 571 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PTGR1Q14914 329 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 FAM182BQ5T319 152 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 HACD4Q5VWC8 232 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 ZDHHC14Q8IZN3 488 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SMG7Q92540 1137 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
CHD9-201ENST00000219084 CMTM7Q96FZ5 175 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 FZD8Q9H461 694 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SLC32A1Q9H598 525 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 CHRAC1Q9NRG0 131 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PIH1D1Q9NWS0 290 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 CMAHPQ9Y471 501 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PCDHB3Q9Y5E6 796 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 RLN1P04808 185 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 ALPPP05187 535 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PORP16435 677 aaPredicted RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 CCR4P51679 360 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SUOXP51687 545 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 WDR4P57081 412 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 PHC1P78364 1004 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 MYBPC1Q00872 1141 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 KCNC4Q03721 635 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GBE1Q04446 702 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GAS6Q14393 721 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 OLFML2AQ68BL7 652 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SHQ1Q6PI26 577 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 GDPGP1Q6ZNW5 385 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 ZNF227Q86WZ6 799 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 ADGRG2Q8IZP9 1017 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 CRYBG2Q8N1P7 616 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 MINDY1Q8N5J2 469 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SLC43A3Q8NBI5 491 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 KBTBD7Q8WVZ9 684 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 TMEM80Q96HE8 168 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 METTL2AQ96IZ6 378 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 NDC1Q9BTX1 674 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 HERC2P3Q9BVR0 1158 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 CDADC1Q9BWV3 514 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 GTPBP2Q9BX10 602 aaKnown RBP4.32□□□□□ -1.72
CHD9-201ENST00000219084 CPNE5Q9HCH3 593 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 PCDHB16Q9NRJ7 776 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 MGAT4BQ9UQ53 548 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 SCML2Q9UQR0 700 aa4.32□□□□□ -1.72
CHD9-201ENST00000219084 TDRD15B5MCY1 1934 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms